Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00874 ATGCTAGCATGCTTGACCtgcagagaagaaaaaaagcacATCAAAACAATGGAAACTTACACTCTATGCAGAACTTGCAGAAAGGGTGTTTTGTTGCCGACAACCTCAGCTGCATATCGTTGTTCTGTCTGCAAAACGGTTAGTGCTTCATTTTCAAGACAAGAGCAATCATGTGAACGAGGTGGAATGCGCCATGAAATGAGAAAACTAGGTGCCAAGTTGTTTGGACATGGTCTGCCAGACAGTTCCAACAAAAATGTCGACATGATCAAACATTATCAGACATACCCAGCTTATTCCTTGTCCAGGAGATGCAACAAGCGTGCTGTTCTTTGCGGAGTTACTTACAGATCAAGGAAACTCAGGCTCAAGGGACCTACCAATGATGTTAACAACATGAAAGAGCTGCTGAAGAAGGTTTTTGAATTCCCAGAAGAGAGTATACTCGTCCTCACAGAACAAGAGAATGATATACAGCCAACCAAGAAGAACATACTGGAATCCTTGCATTGGCTTGTGAAGGACTGCCAGCCAGGTGACTCATTGGTGTTCTATTTCTCAGGACATGGTTTGCAGCAACCTGACTCGAATGAAGACGAGTCTGATGGGTTCGATGAATCACTTTGTCCCGTTGATTTTCTCCGAGAAGGCATGATTGTTGACGATGACATAAACTCTATCCTTGTTTGGCCACTCCAGAAGGGTGTAACACTTCATGCCATTGTTGATGCTTGTCACAGTGGAACAGTTCTTGATCTCACCTGtttttataaccaaaaaaaTGGCATTTGGGAAAATGACAGTCCTCCTGCTAAGGAACCTATGAGAAAACACACAAGTGGTGGATTGGCAATTTGCCTAAGTGCATGTGGAGATAATCAGATGGCTTCTGATACCACAGCTTTCGGTGGGAAGGGAATGAATGGTGTCCTCACCTATATTTTCAcgaaaataatcaaagaaaaccCTGAAATAACATATGGGGGCCTACTAGAAAAGATTCATGAAGAAATTCAGAAAGTTATACAACGTAAATTCCAGCTCGGTTTCCTGAAACATGTCTTCCGCAATAATAAGATTTCACAGGATCCTATTCTATCATCTTCTGAGAAGTTCGATGTTTCTCGGAGAAAATTCACATTGTG 1145 0.4061 MLACLTCREEKKHIKTMETYTLCRTCRKGVLLPTTSAAYRCSVCKTVSASFSRQEQSCERGGMRHEMRKLGAKLFGHGLPDSSNKNVDMIKHYQTYPAYSLSRRCNKRAVLCGVTYRSRKLRLKGPTNDVNNMKELLKKVFEFPEESILVLTEQENDIQPTKKNILESLHWLVKDCQPGDSLVFYFSGHGLQQPDSNEDESDGFDESLCPVDFLREGMIVDDDINSILVWPLQKGVTLHAIVDACHSGTVLDLTCFYNQKNGIWENDSPPAKEPMRKHTSGGLAICLSACGDNQMASDTTAFGGKGMNGVLTYIFTKIIKENPEITYGGLLEKIHEEIQKVIQRKFQLGFLKHVFRNNKISQDPILSSSEKFDVSRRKFTL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00874 381 Pfam Caspase domain 107 371 - -
Bva13g00874 381 Coils Coil 377 381 - -
Bva13g00874 381 SUPERFAMILY Caspase-like 110 340 IPR029030 -
Bva13g00874 381 Gene3D - 78 381 - -
Bva13g00874 381 PANTHER ICE-LIKE PROTEASE (CASPASE) P20 DOMAIN PROTEIN 23 381 - -
Bva13g00874 381 PANTHER METACASPASE-4 23 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00874 Bva-Chr13 4085872 4087515 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00874 K22684 - gmx:100796640 430.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00874 13 4085872 4087515 Bva14g01038 14 4989972 4993254 BWGD
Bva13g00874 13 4085872 4087515 Bva13g00874 13 4085872 4087515 ECH