Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00507 ATGTCTATGAAGAGCAGGGGAGGAGCAGTAGAACATCTGGGTACTAGGAATGTCATACAAAAGAAATGggctctttttctttgcttagGAAGCTTCTGTGCTGGGATGTTCTTCACCAACAGGATGTGGTCGATGCCTGAATACAAAGACGTTTCAAGGACATCTAACGAGGTTGAAcggataaatttaaattctgaGGATTGTAATCTAAATCTTGTTCTAAAGCCCAACTCCAATTACAGTGACGTTGAAGTTTCAAATACACAGAATGTTATCAAGAAACTTGGAAACTCAGAAACAGTTGAATCGACtccaaaaagaagatattttatgGTTATAGGCATCAATACAGCTTTTAGTAGTAGGAAAAGGAGAGACTCTGTTCGTGCCACTTGGATGCCACGAGCcgaggaaagaaagaagttgGAAGAAGAGAAGGGCATAATCATACGTTTTGTTATAGGTCACAGTTCCACGTCTGGTGGGATTCTTGATAGAGCTATTAAAGCAGAAGAGACGCTTCATAATGACTTCATGAGACTGAACCATGTTGAGGGTTACCTGGAATTATCGGCAAAAACAAAGGCTTACTTTTCAACTGCTGTCGCCTTGTGGGATGCAGATTTTTATGTCAAAGTTGATGATGATGTTCACGTGAATTTAGCGACACTTGGATTGACTCTGGCTAGGCACCGTATGAAACCTCTCGTTTACATTGGATGCATGAAGTCTGGTCCTGTCCTGGCTCAGAAGGGAGTGAAATATCATGAACCAGAATACTGGAAGTTTGGTGAGGTAGGAAACAAGTACTTTCGTCATGCCACAGGACAGCTATATGCCATTTCAAGAGACCTGGCAACTTATATATCAATAAACCAGGATGTGCTGCATAAATACGCTAATGAAGATGTCTCATTGGGATCTTGGTTTATTGGTTTAGATGTCGAACATGTTGATGATAGAAGACTGTGTTGTGGTACACCCCCTGATTGTGAATGGAAGGCTCAGGCTGGTAACATCTGTGTTGCTTCATTTGATTGGAGATGCAGTGGAGTTTGCCGGTCCGTGGAGAGAATGAAGGAAGTTCACCAGCGTTGTGGGGAGGAAGAAAGCGCATTGTGGGGTGCAACCTTTTG 1136 0.4005 MSMKSRGGAVEHLGTRNVIQKKWALFLCLGSFCAGMFFTNRMWSMPEYKDVSRTSNEVERINLNSEDCNLNLVLKPNSNYSDVEVSNTQNVIKKLGNSETVESTPKRRYFMVIGINTAFSSRKRRDSVRATWMPRAEERKKLEEEKGIIIRFVIGHSSTSGGILDRAIKAEETLHNDFMRLNHVEGYLELSAKTKAYFSTAVALWDADFYVKVDDDVHVNLATLGLTLARHRMKPLVYIGCMKSGPVLAQKGVKYHEPEYWKFGEVGNKYFRHATGQLYAISRDLATYISINQDVLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQAGNICVASFDWRCSGVCRSVERMKEVHQRCGEEESALWGATF 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00507 378 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 97 370 IPR002659 GO:0006486|GO:0016020|GO:0016758
Bva13g00507 378 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 12 97 IPR002659 GO:0006486|GO:0016020|GO:0016758
Bva13g00507 378 Pfam Galactosyltransferase 123 320 IPR002659 GO:0006486|GO:0016020|GO:0016758
Bva13g00507 378 Gene3D - 100 322 - -
Bva13g00507 378 Pfam Domain of unknown function (DUF4094) 21 96 IPR025298 -
Bva13g00507 378 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE 1-RELATED 97 370 - -
Bva13g00507 378 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE 1-RELATED 12 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00507 Bva-Chr13 2309710 2314552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00507 1 378 Glycosyltransferase AT1G05170 65.450 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00507 K20855 - gmx:100810168 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00507 13 2309710 2314552 Bva13g00507 13 2309710 2314552 ECH
Bva14g00599 14 2823797 2827896 Bva13g00507 13 2309710 2314552 ECH
Bva09g00487 09 2588868 2592234 Bva13g00507 13 2309710 2314552 ECH
Bva07g02150 07 18136052 18139640 Bva13g00507 13 2309710 2314552 ECH