Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00422 atgtcaatgGCTGCAGCTGCCACGGGTCTAAGTCTTATTTGCCAATCCACTGTTGCTGGTGATCCACGGGTTGACTTAAAAAATGAGGTATTTGGTAGACCAGTTTCTAATCTGAGGTTTCGTTGTAATGGAGAACCATTAAAGAGAAAGCTTGGGATTAAAGTACGTGCAGCTGTGCAATTGGGTTTAGAGGGATCAAATAGTAAAGCTTATCCAAAGGGTTTGGATGGGGCTTTTGGTTTGGCTGTGGTTTCAGAAAGGGAATTGAGGGAGAAAGGGTTCTTAGGATTGAGAAAGACGAAGCTCGTGTGCACGATTGGGCCAGCATGTTGCTCAGTGGAGGATTTGGAGAAATTGGCACTGGGAGGAATGAATGTTGCTAGGCTTAACATGTGCCATGGCACCAGGGAGTGGCACCGGGATGTGATTAGGAAGATCAAGAAGTTGAATGAAGAGAAAGGGTTTTCTGTTTCCGTGATGATTGACACTGAGGGAAGCCAGATTCATGTTGTTGATCATGGGGCTCCTTCCTCTGTCAAAGTTGAGGAGGGTTCAATTTGGCTGTTTACTGCCGAACGATTTGAGGGTTCTCGTCCTTTCACCGTTCAAGCAAATTATAACGGCTTTTCTGAAGGTATTGAAGTGGGCGATGAACTTGTTATTGATGGAGGAATGGCATGCTTTGTTGTCATTGAAAAGACTGGAAGTGATTTGCACTGTAAGTGCACAGATCCTGGTCTGTTCCTGCCTAGAGCCAAATTTAGCTTCTGGAGGGATGGCAAGCTTGTGGAGAGAAATTACAAGCTCCCTACTCTGTCAACAAAGGATTGGGCTAACGTTGATTTTGGCATCTCTGAGGGAGTTGACTTTTTTGCCTTGTCCTTTGTCAATGATGCTGATTCTATAAAACATCTACAGAACTACCTGTCTAACAAATCAACCAAATCCGTAAGAGTACTAGCAAAGATAGAGAGCTTGGAATCCCTCCATAATCTGGAGGAAATAGTGCAAGCTTCTGATGGTATCATGGTGGCTCGGGGTGACCTTGGGGTTGAAATACCACTCGAACAAATTCCTGCAGTCCAAGAGGGTATAGTTAACGTTTGTAGACAACTAAACAAGCCAGTAATTGTAGCTTCTCAGCTTCTTGAGTCAATGGTTGAATATCCAACACCAACACGTGCTGAGGTTGCGGATGTTTCTGAAGCAGTTCGACAGTATGCTGATGCTTTGATGTTGTCTGGTGAGTCAGCCATTGGATCATATGGACAGAAGGCTCTGTCAGTCCTGGATATGACTAGCGGTAGGATAGAATCATGGAGTCGCGAGGAAAACAGGCAAAGTGTTCTCACTCACCCTCAACTGGGAGAATCATTGCCAGACCGCATAGCCCAGCAGATATGCACTTGTGCGGTTGAAATGGCTAACAACCTTGGCGTGGATGCCATCTTTGCATACACAAGCCATGGATATATGGCATCGCTCTTATCACGCAACCGGCCAAACCCTCCCATCTTTGCTTTCACCAATGATGAAAGCACCCGTATGGCACTGAATCTGCAATGGGGCGTTGTTTCCCTCCTTATTGATTTGTCAGATGATGTGGAATCCAACGTCTCAAAAACCATTGaacttatgaaatctaaagCATTGATCAGCCCGGGAGATGTTGTTCTAATTGTCTCAGATGTCACTCCAACACGTTTAAGCCCCATAGCTTTCCAATCAATTCAGGTGAAAACCATTAACTA 1751 0.4449 MSMAAAATGLSLICQSTVAGDPRVDLKNEVFGRPVSNLRFRCNGEPLKRKLGIKVRAAVQLGLEGSNSKAYPKGLDGAFGLAVVSERELREKGFLGLRKTKLVCTIGPACCSVEDLEKLALGGMNVARLNMCHGTREWHRDVIRKIKKLNEEKGFSVSVMIDTEGSQIHVVDHGAPSSVKVEEGSIWLFTAERFEGSRPFTVQANYNGFSEGIEVGDELVIDGGMACFVVIEKTGSDLHCKCTDPGLFLPRAKFSFWRDGKLVERNYKLPTLSTKDWANVDFGISEGVDFFALSFVNDADSIKHLQNYLSNKSTKSVRVLAKIESLESLHNLEEIVQASDGIMVARGDLGVEIPLEQIPAVQEGIVNVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGSYGQKALSVLDMTSGRIESWSREENRQSVLTHPQLGESLPDRIAQQICTCAVEMANNLGVDAIFAYTSHGYMASLLSRNRPNPPIFAFTNDESTRMALNLQWGVVSLLIDLSDDVESNVSKTIELMKSKALISPGDVVLIVSDVTPTRLSPIAFQSIQVKTIN 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00422 583 TIGRFAM pyruv_kin: pyruvate kinase 98 566 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva13g00422 583 Gene3D - 167 269 IPR015806 GO:0004743|GO:0006096
Bva13g00422 583 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 92 440 IPR015813 GO:0003824
Bva13g00422 583 Pfam Pyruvate kinase, barrel domain 98 437 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva13g00422 583 ProSitePatterns Pyruvate kinase active site signature. 317 329 IPR018209 GO:0004743|GO:0006096
Bva13g00422 583 Pfam Pyruvate kinase, alpha/beta domain 466 563 IPR015795 -
Bva13g00422 583 PANTHER PYRUVATE KINASE 41 582 - -
Bva13g00422 583 PANTHER PYRUVATE KINASE 41 582 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva13g00422 583 SUPERFAMILY PK beta-barrel domain-like 168 255 IPR011037 -
Bva13g00422 583 PRINTS Pyruvate kinase family signature 371 395 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva13g00422 583 PRINTS Pyruvate kinase family signature 396 414 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva13g00422 583 PRINTS Pyruvate kinase family signature 319 345 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva13g00422 583 PRINTS Pyruvate kinase family signature 346 370 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva13g00422 583 PRINTS Pyruvate kinase family signature 415 431 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva13g00422 583 PRINTS Pyruvate kinase family signature 155 171 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva13g00422 583 PRINTS Pyruvate kinase family signature 288 302 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva13g00422 583 Gene3D - 440 571 IPR036918 -
Bva13g00422 583 Gene3D - 100 430 IPR040442 -
Bva13g00422 583 SUPERFAMILY PK C-terminal domain-like 459 565 IPR036918 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00422 Bva-Chr13 1948556 1952690 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00422 K00873 - gmx:100780644 905.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00422 13 1948556 1952690 Bva13g00422 13 1948556 1952690 ECH