Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00416 ATGAAGCTGAGACTCAGATCACTCGAATCCAAGGCAACCCTAAAGTTTGAAGTTCCCGATTCATGTTCTTTGCAGGAACTCGAAGAGATCCTTTCTCAGACAATTTCATCCCCTTCTTCTCTGTATCTGTCGCTTAACAGGAAGGACGAAATTCAAGCTTCGTCACCAGATGAATCCTTGCACTCCATTGGCATCGCTACTGGTGACCTGATTTTCTACACTCTCGACCCCAACGCCTTCTCCCTTGAAACCCTTGTCCACAAGCCTGGACCCTCGCAGATCGAACCCACCAATCCAATCGCACAGGAAAGTATGGAATTCCTCGGTGGCGTTCAAAAGTCTCagaatttggaaaatttggaTCAAAATTCAACGATACCCGGAGGATCAATGGTGACGGTTGAGATTGAAAAGGGAAATGCTCTTCCAGAAGCAGAAGAGGCCGCCGTGGCCGAAAAGGAGGGGCTTTTTGGAGCGGAGAGTACGGATATAGTTGATAGGTCTGCTGAGACGGCGAACATGACAAAGAACTCTGAACCTTCTTTCGTGAGAAGGGTGCTCAGAGAAGCGCTTGGCAATGACGTTACTGATCAAAAGCTCTTGGTCATTGCGGTTCATGCCGTCATTTTAGAATCTGGATTTGTTCGGTTGGATAAGGGTTCAGGTATGGCAGTTGGTTGCTCTCACCTTCTGGATGAGTGGCCTTCAACAGCTACGACGATAACATTGAGGTATGCTCTGCCTGAAATTCTAACTAATGGTTCTGGTGGGACCGATTCTGTAGTCTTGAAATTTCAGAGTTTGGgacaatttgtaaatatttatgggTCCTTGTCCGATGGAGGCTCTGGCTTGCATAGAGTATgtttagataaatataaatttgctCGGGCTTTAGAAATGATGCTGCTAAAATCAGAATTGaatgatagaaatgaagaCCGTGAGAATGAAGTTTTCAAATTGTGGAAGATGGTCAAAGATGGGCTTGCACTGCCACTCTTAATTGATCTTTGTGACAAGACTGGGTTGGATCCTCCACCATGTTTTATGCGCCTTCCCACAGAACTGAAGCTCAAAATTTTGGAGTGTCTTCCTGGTGTTGATGTTGCCAAATTGGCTTGTGTGTGTTCAGAATTGAGGTATATGTCCTCGAGTAATGACTTGTGGAAGCAGAAATTTGTGGAGGAGTTTGGACAAGGGAGTAGAGGAGGAggaattaatttcttcaaggATTTGTTTGTTGTATCTTGGAAGAGAAAGACGGAATTGGAACATCGAACATTCATTACTCGACCAATTATTCGTAGGATCAGATACTTCCCACTGAGAAGAGATATCCCTAATCCATTTGCTGTACATTCAACTCCAATGATGGGTGGAGATTATGAACGTTACCCAGTATTTGGTTTCGCTTCTCGTTCAGACAACCTGGTATGCTGTTCCCTCGATTTTCCACATCGGAGAAGTTTATCTCCGTGTAATCTGGGAGGATTCAATAACTA 1505 0.4239 MKLRLRSLESKATLKFEVPDSCSLQELEEILSQTISSPSSLYLSLNRKDEIQASSPDESLHSIGIATGDLIFYTLDPNAFSLETLVHKPGPSQIEPTNPIAQESMEFLGGVQKSQNLENLDQNSTIPGGSMVTVEIEKGNALPEAEEAAVAEKEGLFGAESTDIVDRSAETANMTKNSEPSFVRRVLREALGNDVTDQKLLVIAVHAVILESGFVRLDKGSGMAVGCSHLLDEWPSTATTITLRYALPEILTNGSGGTDSVVLKFQSLGQFVNIYGSLSDGGSGLHRVCLDKYKFARALEMMLLKSELNDRNEDRENEVFKLWKMVKDGLALPLLIDLCDKTGLDPPPCFMRLPTELKLKILECLPGVDVAKLACVCSELRYMSSSNDLWKQKFVEEFGQGSRGGGINFFKDLFVVSWKRKTELEHRTFITRPIIRRIRYFPLRRDIPNPFAVHSTPMMGGDYERYPVFGFASRSDNLVCCSLDFPHRRSLSPCNLGGFNN 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00416 501 Gene3D - 351 431 - -
Bva13g00416 501 SUPERFAMILY F-box domain 343 403 IPR036047 GO:0005515
Bva13g00416 501 SMART fbox_2 353 393 IPR001810 GO:0005515
Bva13g00416 501 Pfam F-box domain 350 391 IPR001810 GO:0005515
Bva13g00416 501 ProSiteProfiles F-box domain profile. 347 393 IPR001810 GO:0005515
Bva13g00416 501 PANTHER F-BOX PROTEIN SKIP22 1 500 - -
Bva13g00416 501 PANTHER F-BOX PROTEIN SKIP22 1 500 - -
Bva13g00416 501 Gene3D - 178 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00416 Bva-Chr13 1928186 1929993 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00416 K10293 - gmx:100778313 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00416 13 1928186 1929993 Bva13g00416 13 1928186 1929993 ECH