Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00396 ATGAAGTTTGGGACAGAAGCCTACGTTTTATTGCTTTTCTTATGGCTTTTACTCGTCTCAGGGCTTGGGGTCCATGCTATCTCTTATGATTATTCTGCAACTACAGAGTGCCTTGTAGAACCCCAGAGAGCCCTTTATGGAGGAGGAATTATAGTGAATCCAGAATTTGATCACAGCATAGAGGGTTGGACAGTGTTTGGCAAAGCAGCAATCGAGCAGCGAATATCAAAGGAAGGCAATAGATTCATTGTTGCGCGCAACAGAACACAGCCTTTAGATAGTTTCTCTCAGAAAGTTCAACTTGATAAAGGAATTATATACAGCTTTTCTGCTTGGGTGCAACTCAGTGAAGGAAGTGAAACTGTGTCGGTAATATTTAAAGGTGACAGCAGTGAAGTGATGCATGGTGGACAAGTGACTGCAGAGCATGGATGTTGGACTCTTCTAAAAGGTGGCATAGTTGCAAATATCTCAAGCCCTGTTGAGATTCTTTTCGAGTGGACAATGCAGAGCGAGAATACAACAGTGGAAATATGGGCTGACAGTGTCTCACTACAACCATTTACCAAGCAACAATGGAGATCACACCAGGACAAGAGCATTGAGAAGGTGCGCAAGAGCATGGTCAGATTCCAGATAAGCGAAGCAACTGATTCAGCATTGGAAGGAGCTAGGGTGCTATGTATTCAAAGAAAGCCAAGATTCCCATTTGGATGTGGTATGAACCACCACATCCTTGAAAGCACTGAGTACCAGAACTGGTTTGCATCAAGATTCAAATACACAACTTTCACCAACGAGATGAAGTGGTACAGCACAGAGACAAAGCAAGGTCAAGAAAACTATACAATCCCAGATGGCATGCTGAAATTTGCCAAACATCATGGCATTTCTGTCCGAGGCCATAACATTTTCTGGGACAATCCGAAAGAACAGCCTGAATGGGTCAAATCTGTGTGTCCTCACGAATTACGAAAGGCGGCAGCAAGAAGAATAAAGTCTGTGGTTTCAAGATACAGAGGGGAGCTGATTGCATGGGATGTGGTTAATGAAAATCTCCACTTCAACTTTTTTGAGAATAAACTTGGCGGAAATGCTTCTGCAGAATATTATGCTAAAACTTACCAGCTTGATCCAAAGCCAATCCTATTCCTGAACGAGTATAACACTATTGAATATTGTAGGGATAAGACAGCCACTCCAGTGAATTATATGAAGAAGCTTGAGcaaattctctcttttccaGGCTGTGCTAATATATCAGCTGGGATTGGGCTGCAAGGCCACTTCTGTTCTGGCCAACCCAATCTGGCTTACATGAGATCTGCTCTAGACTTGCTTGGTACTGCTGGACTTCCCATATGGGTCACAGAAGTGAGTGTGGCAAGAGACGCAAATcagGCACAATACTTGGAAGAGATACTAAGGGAGGCCTACGCTCACCCTGCTGTTGATGGGATTATAGCCTTTGCTGGTCCAGCAATAGCTGGTTTTAATGAAACGACCCTTGTGGATGAGAACTTCCAAAACACTCCAGCTGGTGATGTCGTGGACATGTTGATTAACGAGTGGAAATATGAACCTCGGGAAGCTACAGCAGATAGCAGAGGATATGTGGATGTTTCGCTATATCATGGAGATTATGATGTAACAGTAATGCATCCGATCACCAACTCCTCTAAAACAGTGAATCTAAGTGTAAGCAAAGATGTCCCACAAGAAAGCATCACTGTGAAAATCCGTACCTG 1748 0.4302 MKFGTEAYVLLLFLWLLLVSGLGVHAISYDYSATTECLVEPQRALYGGGIIVNPEFDHSIEGWTVFGKAAIEQRISKEGNRFIVARNRTQPLDSFSQKVQLDKGIIYSFSAWVQLSEGSETVSVIFKGDSSEVMHGGQVTAEHGCWTLLKGGIVANISSPVEILFEWTMQSENTTVEIWADSVSLQPFTKQQWRSHQDKSIEKVRKSMVRFQISEATDSALEGARVLCIQRKPRFPFGCGMNHHILESTEYQNWFASRFKYTTFTNEMKWYSTETKQGQENYTIPDGMLKFAKHHGISVRGHNIFWDNPKEQPEWVKSVCPHELRKAAARRIKSVVSRYRGELIAWDVVNENLHFNFFENKLGGNASAEYYAKTYQLDPKPILFLNEYNTIEYCRDKTATPVNYMKKLEQILSFPGCANISAGIGLQGHFCSGQPNLAYMRSALDLLGTAGLPIWVTEVSVARDANQAQYLEEILREAYAHPAVDGIIAFAGPAIAGFNETTLVDENFQNTPAGDVVDMLINEWKYEPREATADSRGYVDVSLYHGDYDVTVMHPITNSSKTVNLSVSKDVPQESITVKIRT 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00396 582 Gene3D - 39 188 - -
Bva13g00396 582 SUPERFAMILY Galactose-binding domain-like 47 187 IPR008979 -
Bva13g00396 582 SMART glyco_10 268 520 IPR001000 GO:0004553|GO:0005975
Bva13g00396 582 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 223 520 IPR001000 GO:0004553|GO:0005975
Bva13g00396 582 Gene3D Glycosidases 226 529 - -
Bva13g00396 582 PANTHER GLYCOSYL HYDROLASE 34 579 IPR044846 GO:0004553|GO:0005975
Bva13g00396 582 SUPERFAMILY (Trans)glycosidases 222 526 IPR017853 -
Bva13g00396 582 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 34 579 - -
Bva13g00396 582 Pfam Carbohydrate binding domain 49 160 IPR003305 GO:0016798
Bva13g00396 582 Pfam Glycosyl hydrolase family 10 233 477 IPR001000 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00396 Bva-Chr13 1834784 1837777 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00396 25 570 Glycoside Hydrolase AT4G33840 48.452 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00396 - - gmx:100802367 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00396 13 1834784 1837777 Bva13g00396 13 1834784 1837777 ECH