Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00384 ATGAAAAACTACATTTTCTtatccctttttctttcttttctgattgTTCCAATTTCCTGCCAGAAACATGCATGTGACGAAGGTTCTCCACAGACTAGCAAGTTCCCATTTTGCAACACTTCCCTATCTTATGTGGCCAGAGCCAAGGACTTGGTGTCGCGCCTAACTCTCCAAGAGAAGGCACAACAACTAGTCAATGCAGCTGCTGGTATATCCCGGCTGGGTGTGCCGGCTTATGAATGGTGGTCGGAAGCACTTCATGGTGTGTCCAATGTAGGGCCAGGCACACGCTTTGACAGCAGGGTGCCCGGTGCCACTAGTTTTCCAGCAGTGATACTATCAGCTGCTAGCTTTAATGCATCTTTGTGGTACAAGATGGGGCAGGTTGTGTCAACTGAGGCTAGAGCCATGTACAATGTGGGCTTGGCTGGTTTGACATTTTGGAGTCCTAATGTGAATGTGTTTCGTGACCCCAGATGGGGCCGTGGCCAGGAAACACCAGGGGAAGACCCTTTGGTTGTTTCCAGATATGCTGTCAAGTATGTTACTGGTCTCCAACAAGTGGATGAAGCAACTTCACAAGGTGATAGGCTTAAGGTTTCAAGTTGTTGCAAGCATTATACTGCCTATGATCTTGACAATTGGAAAGGCATTGATCGGTTTCACTTTGATGCAAAGGTGACAAAGCAAGACTTGGAGGACACGTATCAGCCACCATTTAAGAGCTGTGTGGAGGAGGGGCATGTTAGCAGTGTAATGTGTTCTTATAACAGGGTGAATGGGATTCCTACTTGTGCTGACCCAGACCTACTCCAAGGGATAGTCAGAGGCCAATGGGGTCTAGATGGATACATTGTTTCAGACTGTGATTCAGTGGAAGTATATTACAATGCCATTCATTACACTGCAACACCTGAAGATGCAGTAGCTCTTGCCTTGAAAGCAGGTCTGAACATGAACTGTGGCAACTTTTTAGGAAAATACACAGTAAATGCAGTCAACCAGAAAATGGTGGATGTATCAATTGTAGACCAGGCTTTAGTGTACAACTACATAGTCTTAATGAGACTAGGGTTCTTTGATGATCCCAAATCAATTCCATTTGCAAATCTTGGGCCATCTGATGTATGTACTAGCGATAACCAACAATTAGCCCTTGATGCTGCAAAGCAAGGGATAGTTCTGCTGGAAAACAAAGGAGCTCTTCCTTTGTCCAaaactaacataaaaaatCTTCTTGTGGTTGGACCAAATGCCAATGCCACCACAGTTATGATCAGCAACTACGCTGGGATACCTTGCCGCTATACTAGCCCTTTACAAGGACTCAAGAAGTATATTTCAACTGTAACTTATGCACCTGGTTGTAATAATGTTAAATGCAGTGATCAAAGCCTTATTTCTGCGGCGACTAAAGCCGCATCCAATGCAGATGCAGTTGTGGTGGTTGTGGGATTAGACCAATCCATTGAGGCAGAAGGCCTTGACAGAGTGAACTTAACATTACCAGGATTTCAAGAGAAGCTTGTGAAAGATGTCGCTGATGCTACCAAAGGAACAGTGATCCTAGTCATAATGGCAGCTGGTCCAATAGACATCTCTTTCACTAACAGTGTGAACAAAATAGAGGCAATTTTGTGGGTAGGGTATCCTGGTCAAGATGGAGGAGATGCTATAGCCCAAGTAATATTTGGAGACTACAATCCAGGTGGTAGGTCACCATTTACATGGTACCCACAATCCTATGCAGATCAAGTAGCTATGAGTGACATGAACATGAGGGCCAACAGCAGCAGGAATTTCCCAGGAAGAACCTACAGGTTTTACACTGGGAAATCTCTTTATGAATTTGGCCATGGATTAAGCTACTCTACCTTCTGCACGTACTTAGCATCTGTTCCCTCCACTATACTGATCGAGCACAACACTTCCTTTTCTGACCCACATAACATTCTCTCCACCAACTCAGCCACCCAACTTGACGGCCAAGCAATTGACATCTCAACCATTAATTGCTTGGATTTGTCATTTCTGCTTATCACTGGTGTCAAGAACAACGGCCCCCTTGATGGTTCCCATGTGGTGCTAGTGTTCTGGGAGCCACCAAGTTCAGAGCTGATATCAGGAATACCGATTAAACAATTGATAGGATTTGAAAGGGTTGATATTAAGGTTGGCAAGACAGAGTTTGTGACAGTGAAGATAAATATATGCGAGCTGCTAACTGTTGTCGACAGTGATGGAAAAAGGAAGTTGGTCATTGGAGAGCACACCATTTTGATTGGTTCCTCCAATGAATCCCAGATTAGACACCACGTTGATGTCAGGCTTTCAGGTTTCAGCAAGTA 2348 0.4391 MKNYIFLSLFLSFLIVPISCQKHACDEGSPQTSKFPFCNTSLSYVARAKDLVSRLTLQEKAQQLVNAAAGISRLGVPAYEWWSEALHGVSNVGPGTRFDSRVPGATSFPAVILSAASFNASLWYKMGQVVSTEARAMYNVGLAGLTFWSPNVNVFRDPRWGRGQETPGEDPLVVSRYAVKYVTGLQQVDEATSQGDRLKVSSCCKHYTAYDLDNWKGIDRFHFDAKVTKQDLEDTYQPPFKSCVEEGHVSSVMCSYNRVNGIPTCADPDLLQGIVRGQWGLDGYIVSDCDSVEVYYNAIHYTATPEDAVALALKAGLNMNCGNFLGKYTVNAVNQKMVDVSIVDQALVYNYIVLMRLGFFDDPKSIPFANLGPSDVCTSDNQQLALDAAKQGIVLLENKGALPLSKTNIKNLLVVGPNANATTVMISNYAGIPCRYTSPLQGLKKYISTVTYAPGCNNVKCSDQSLISAATKAASNADAVVVVVGLDQSIEAEGLDRVNLTLPGFQEKLVKDVADATKGTVILVIMAAGPIDISFTNSVNKIEAILWVGYPGQDGGDAIAQVIFGDYNPGGRSPFTWYPQSYADQVAMSDMNMRANSSRNFPGRTYRFYTGKSLYEFGHGLSYSTFCTYLASVPSTILIEHNTSFSDPHNILSTNSATQLDGQAIDISTINCLDLSFLLITGVKNNGPLDGSHVVLVFWEPPSSELISGIPIKQLIGFERVDIKVGKTEFVTVKINICELLTVVDSDGKRKLVIGEHTILIGSSNESQIRHHVDVRLSGFSK 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00384 782 Gene3D - 379 625 IPR036881 GO:0004553|GO:0005975
Bva13g00384 782 SUPERFAMILY (Trans)glycosidases 35 392 IPR017853 -
Bva13g00384 782 Pfam Glycosyl hydrolase family 3 N terminal domain 100 320 IPR001764 GO:0004553|GO:0005975
Bva13g00384 782 Gene3D Immunoglobulins 676 776 IPR013783 -
Bva13g00384 782 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 393 626 IPR036881 GO:0004553|GO:0005975
Bva13g00384 782 PANTHER BETA-D-XYLOSIDASE 5-RELATED 6 775 - -
Bva13g00384 782 PANTHER SUGAR HYDROLASE-RELATED 6 775 IPR044993 GO:0009044|GO:0045493
Bva13g00384 782 SMART Fn3_like_2 693 765 IPR026891 -
Bva13g00384 782 Gene3D - 47 367 IPR036962 GO:0004553|GO:0005975
Bva13g00384 782 Pfam Fibronectin type III-like domain 693 764 IPR026891 -
Bva13g00384 782 PRINTS Glycosyl hydrolase family 3 signature 274 292 IPR001764 GO:0004553|GO:0005975
Bva13g00384 782 PRINTS Glycosyl hydrolase family 3 signature 108 127 IPR001764 GO:0004553|GO:0005975
Bva13g00384 782 PRINTS Glycosyl hydrolase family 3 signature 200 216 IPR001764 GO:0004553|GO:0005975
Bva13g00384 782 Pfam Glycosyl hydrolase family 3 C-terminal domain 393 623 IPR002772 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00384 Bva-Chr13 1795331 1798469 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00384 1 781 Glycoside Hydrolase AT3G19620 69.036 0.0 1135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00384 K15920 - gmx:100817869 1314.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00384 13 1795331 1798469 Bva13g00384 13 1795331 1798469 ECH