Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00383 ATGCCCTCATCAATGGCGAGATTCGTAGTGGAGAAGAACAGCTTGAGGGTGACTTCGCCGGATAAAATCAGTGGTAACTACAATAGTGCGATTGGGAACTTTGGAATACCTCAGTATGGAGGTAGCATGGCTGGAAACGTGGTGTACCCGAAGGATAACCAGAAGGGTTGCAAAGAGTTCGATGAGTCTGGGATTTCCTTCAAGTCGAAGCCTGGAGCTCTTCCGACCATCGTTTTACTTGATCGTGgaaGTTGCTTCTTTGCTTTGAAGGTCTGGAATGCCCAGAAAGCTGGAGCTTCCGCAGTTCTTGTCGCAGATGATGTCGAGGAAAGCTTAATAACTATGGACACGCCTGAAGAGGATGGATCATCGGCAAAGTACATAGAGGACATTACTATACCATCTGCTCTCATTGAAAAAGGTTTTGGTGAAACATTAAAGAAAGCCATAAGAGGTGGAGATATGGTCAATGCAAATCTTGATTGGAGAGAGTCTGTCCCCCACCCCGATGATCGTGTGGAGTACGAGCTCTGGAGCAATAGCAATGATGAATGTGGCGTTAAATGCGATATGTTGATGGAATTTGTGAAGGATTTCAAGGGTGCGGCACAGATTCTAGAGAAAGGTGGTTACACTCAGTTTACACCACACTATATAACTTGGTACTGTCCCCAGGCATTCACATTAAGCAAACAGTGCAAGTCCCAATGCATAAATCATGGAAGATACTGTGCTCCTGATCCTGAGCAGGACTTCAGCACAGGTTATGATGGCAAAGATGTggttattgaaaatttaaggCAGCTGTGTGTTTTTAAGGTGGCAAATGAAAGCGGCAAGCCTTGGGTGTGGTGGGACTATGTGACTGACTTTCAAATTAGATGTCCcatgaaggagaaaaaatacaataagGAATGCGCTGATGCCGTTATTAGATCACTCGGTCTTGATATTAATAAGATAGAAAAGTGTATGGGAGATCCAAATGCCGATTCTGATAATCCTGTTTTGAAAGAAGAGCAAGATGCTCAAGTTGGGAAGGGATCTCGAGGTGATGTCACCATATTGCCTACCCTTGTTGTCAATAACCGACAATATCGAGgaaaATTAGAGAAAGGTGCTGTTTTGAAGGCCATCTGTTCTGGGTTTGAGGAAACTACTGAACCGGCTGTTTGTTTGAGCACGGATGTGGAGACAAATGAGTGCTTGGATAACAATGGTGGTTGTTGGCGGGATAAAATAGCCAACATCACTGCATGCAAGGATACATTCCGTGGGCGAGTATGTGAATGCCCTCTGGTTGACGGTGTGCAGTTCAAAGGAGATGGTTATACTACCTGTCAAGCCAGTGGACCGGGAAGgtgcaaaattcaaaatggtGGTTGTTGGCATGAAGCCCGGAATGGACATGCATTTTCGGCTTGTCAAGATAATGGGGAGGTAAGATGCCAGTGTCCTGTTGGATTCACGGGTGATGGTGTCAAAAATTGTGAAGATATTGATGAAtgcaaagagaagaaagccTGTCAATGCCCTGAATGTACCTGCAAGAATACCTGGGGGAGCTATGACTGCAGCTGTAGTGGGGATCTTCTGTATATCAGGGATCATGATGCCTGCATAAGTAAGACAGCCAGTCAGGGAAGATCTACTTGGTCCGCTTTTTGGGTCATTATGATTGGGTTGGTTTTGGCTGCTGGAGGAGCATATCTTGTGTACAAATACAGAATAAGGGCCTACATGGACTCTGAAATCAGAGCTATCATGGCACAGTATATGCCTTTGGATAGCCAAGCAGAAGTTCCGAATCATGTCAACGATGAAAGAGCATA 1832 0.4329 MPSSMARFVVEKNSLRVTSPDKISGNYNSAIGNFGIPQYGGSMAGNVVYPKDNQKGCKEFDESGISFKSKPGALPTIVLLDRGSCFFALKVWNAQKAGASAVLVADDVEESLITMDTPEEDGSSAKYIEDITIPSALIEKGFGETLKKAIRGGDMVNANLDWRESVPHPDDRVEYELWSNSNDECGVKCDMLMEFVKDFKGAAQILEKGGYTQFTPHYITWYCPQAFTLSKQCKSQCINHGRYCAPDPEQDFSTGYDGKDVVIENLRQLCVFKVANESGKPWVWWDYVTDFQIRCPMKEKKYNKECADAVIRSLGLDINKIEKCMGDPNADSDNPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLEKGAVLKAICSGFEETTEPAVCLSTDVETNECLDNNGGCWRDKIANITACKDTFRGRVCECPLVDGVQFKGDGYTTCQASGPGRCKIQNGGCWHEARNGHAFSACQDNGEVRCQCPVGFTGDGVKNCEDIDECKEKKACQCPECTCKNTWGSYDCSCSGDLLYIRDHDACISKTASQGRSTWSAFWVIMIGLVLAAGGAYLVYKYRIRAYMDSEIRAIMAQYMPLDSQAEVPNHVNDERA 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00383 610 PANTHER VACUOLAR-SORTING RECEPTOR-LIKE PROTEIN 2 589 - -
Bva13g00383 610 Pfam PA domain 44 146 IPR003137 -
Bva13g00383 610 ProSitePatterns Calcium-binding EGF-like domain signature. 499 525 IPR018097 GO:0005509
Bva13g00383 610 ProSitePatterns EGF-like domain signature 2. 483 497 IPR000742 -
Bva13g00383 610 Gene3D Laminin 453 533 - -
Bva13g00383 610 SMART egfca_6 499 541 IPR001881 GO:0005509
Bva13g00383 610 Gene3D - 5 169 - -
Bva13g00383 610 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 2 589 - -
Bva13g00383 610 CDD PA_VSR 33 160 - -
Bva13g00383 610 CDD EGF_CA 499 527 - -
Bva13g00383 610 SUPERFAMILY PA domain 39 150 IPR046450 -
Bva13g00383 610 Pfam Complement Clr-like EGF-like 482 502 IPR026823 -
Bva13g00383 610 Gene3D Laminin 392 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00383 Bva-Chr13 1787016 1791744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00383 6 610 Miscellaneous Gene Families AT2G14740 84.628 0.0 1097
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00383 - - gmx:100803958 1178.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00383 13 1787016 1791744 Bva13g00383 13 1787016 1791744 ECH