Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00377 ATGAAGTTTATGAAACTTGGTTCCAAGCCAGATACGTTTCAGTCTGATGGGAACAATGTTAGGTATGTGGCAAGTGAGTTGGCATCAGATGTCATTGTTATTGTGGGGGATGTGAAATTTTATCTACACAAGTTCCCTCTTCTGTCAAAGAGTGCTCACCTACATAAGTTGATCACCTCCAGTAATGAAGAAAACAGAGACGAAGTTCACATTTCTGAAATACCTGGTGGCACTGCTGCTTTTGAGATATGTGCCAAGTTTTGTTACGGCATGATTGTCACCCTAAATGCTTACAACGTAATTGCAGCTCGATGTGCAGCAGAGTTCCTTGGAATGCATGAGACAATTGAGAAAGGGAACCTCATTTACAAGATTGATGTTTTCCTTAGCTCTAGCATTTTTCGCAGTTGGAAGGATTCCATCATTGTTCTTCAGTCTTCCAAGTCTATGTCACCTCTGGTCGAGGACCTGAAGGTGATCAGTCATTGCATTGAATCTATAGCAAATAAGGCATGCGTTAATGTATCTAAAGTTGACTGGTCCTACACATATAACCGAAAGAAGCTCCCAGAGGAAAATGGAGATGATCCAAACCCGAATGGAGTCAGAACTCGTCGGGTGCCTAAGGATTGGTGGGTTGAGGATTTGTGTGAGCTTGAAGttgatttatataaaagtgTAATTACGAATATTAAAACCAAGGCAATTCTATCTAATGAAGTAATTGGAGAAGCCTTGAAAGCTTATGCTTACAAAAGGTTGCCTGGTTTCAGCAAGGGTATCAACCAATGTGAAGATATGTCTAAGTATAGATTAATAGTTGAAACAATTGTGTGCTTATTGCCTACTGAGAAAGGTAGTGTTTCTAGTAGTTTCTTACTCAAGTTATTGAAAGCAGCCAATTTTGTAGAATCAGGAGATATGACTAAACAAGAGCTGGTAAGGAGAATAGGGCAGCAATTGGAGGCTGCTTCAGTAACTGATCTTTTGATACGAGCATCTGACCAGGAACCTACTATCTATGATGTTAGTATCGTACAGAGAATTGTAGAAGAGTTTTTGACACAAGATCACAATGCTGAAATTGAATCAGATGAAGGAGGTGGGCCTGAGGAGATCAGAAGGCCAGGGATTTTATCAGATGCTTCCAAGCTGATGGTGGCAAAACTTGTAGATGGATACCTTGCTGAAATTGCCAAGGATCAAAGTTTACCTGCGTCCAAGTTTGTTGATCTTGCTGAATTGGTGTCTGGCATCTCTCGTCCGTCGCATGATGGACTTTACAGGGCCATTGACATGTACCTTAAGGAACATCCTGGGATCAGCAAAAGTGAGAGGAAGAGAATATGCAAGCTGATGGACTGTAGAAAGTTGTCAGTTGATGCCTGCATGCATGCTGTGCAAAATGAGAGGCTCCCTTTACGCGTAGTTGTGCAGGTGCTTTATTTTGAGCAATTAAGAACTGCTGCATCATCGGGCACTAGCACTCCTGATATTCCAAGAGGAATGAAGGATCTGCAAAATGGATCCCATGGTAGCTCAAGGTCTGGAACAACCAACACAGAAGATGATGTGGACGCCATTGCCATGGCCGAGGAGCTCAAGGCATTAAGAAAAGAACTTGCATCCTTGAGGTTGAGCAATGGAGTTGGAGGCCACGACAAGGACGGAGATAATAAACCTAACGTTGACAGGGCTGTTGTGAGCAAGATGAGAGGGTTGCTCAAGTCAAGAAAGTCCTTCGTAAAGCTGTGGGCAAGCAAAGGGGCACAAGGGGAAAATAGTGGCTCTGACTCATCTGAGAGTATTGGTTCTGCTAACCCAGAAGAAGCTAAATCTACACCTTCCAGAAATAGGAGGCATTCAGTTTCCTG 1874 0.4253 MKFMKLGSKPDTFQSDGNNVRYVASELASDVIVIVGDVKFYLHKFPLLSKSAHLHKLITSSNEENRDEVHISEIPGGTAAFEICAKFCYGMIVTLNAYNVIAARCAAEFLGMHETIEKGNLIYKIDVFLSSSIFRSWKDSIIVLQSSKSMSPLVEDLKVISHCIESIANKACVNVSKVDWSYTYNRKKLPEENGDDPNPNGVRTRRVPKDWWVEDLCELEVDLYKSVITNIKTKAILSNEVIGEALKAYAYKRLPGFSKGINQCEDMSKYRLIVETIVCLLPTEKGSVSSSFLLKLLKAANFVESGDMTKQELVRRIGQQLEAASVTDLLIRASDQEPTIYDVSIVQRIVEEFLTQDHNAEIESDEGGGPEEIRRPGILSDASKLMVAKLVDGYLAEIAKDQSLPASKFVDLAELVSGISRPSHDGLYRAIDMYLKEHPGISKSERKRICKLMDCRKLSVDACMHAVQNERLPLRVVVQVLYFEQLRTAASSGTSTPDIPRGMKDLQNGSHGSSRSGTTNTEDDVDAIAMAEELKALRKELASLRLSNGVGGHDKDGDNKPNVDRAVVSKMRGLLKSRKSFVKLWASKGAQGENSGSDSSESIGSANPEEAKSTPSRNRRHSVS 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00377 624 SUPERFAMILY POZ domain 21 117 IPR011333 -
Bva13g00377 624 ProSiteProfiles NPH3 domain profile. 210 487 IPR027356 -
Bva13g00377 624 MobiDBLite consensus disorder prediction 588 624 - -
Bva13g00377 624 MobiDBLite consensus disorder prediction 590 612 - -
Bva13g00377 624 MobiDBLite consensus disorder prediction 491 523 - -
Bva13g00377 624 PANTHER OS12G0117600 PROTEIN 1 621 IPR043454 -
Bva13g00377 624 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY2 1 621 IPR029960 GO:0009958
Bva13g00377 624 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Bva13g00377 624 Gene3D Potassium Channel Kv1.1; Chain A 6 121 IPR011333 -
Bva13g00377 624 Pfam NPH3 family 210 463 IPR027356 -
Bva13g00377 624 Coils Coil 527 547 - -
Bva13g00377 624 Pfam BTB/POZ domain 26 117 IPR000210 GO:0005515
Bva13g00377 624 MobiDBLite consensus disorder prediction 507 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00377 Bva-Chr13 1749557 1755265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00377 8 493 EF-hand Containing Proteins AT3G44820 36.660 5.03e-101 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00377 - - gmx:100807318 1001.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00377 13 1749557 1755265 Bva13g00377 13 1749557 1755265 ECH
Bva13g00377 13 1749557 1755265 Bva14g00469 14 2252423 2258379 ECH