Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00367 ATGAAAGCCAAAGCGAAAAGTTCAAAATTGAAGCTGGGTCTACCTACGTTATTAGTCCTTTGTTCCGTTTTCCTATTCGCTGGATTCTTTCTGTCCACTCTTCTCTTTCAGGATTTGGGTGATGTGCGACCAAGGTTGAGAATACTTGAAGAATCGACAGCGAAGGGATATGATGCGCTTGCGCATGGGAAAACTGGGGATCCTTTTGTTGGGTCAATCCCATTACAGGTTTTAAGTTGGAAACCACGAGCACTTTACTTTCCAAACTTTACAAGTCCAGAACTGTGTGAACGAATAATTGAAATGGCAAAATCAAAGCTTGAGCCATCAAAATTGGCTCTTCGAAAAGGAGAAACTGATGACAGCACCCAAGGCACTAGAACAAGTTCAGGCACATTCATCAGTGCATCAGAAGATAAAACTGGCATCTTAGACTttgttgagagaaaaattgcTAAAGTTACAATGCTCCCTAAGAACCATGGAGAGGCATTCAACGTACTGCGCTATGAACTTGGCCAGAAATACGATTCTCACTATGATGCATTCGATCCCTCAGAATATGGCCCTCAACGGAGCCAAAGGATGGCTTCCTTCCTGTTGTACCTATCAAATGTAGAAGAAGGCGGAGAAACAATGTTCCCTTTTGAGGATGGTTTAAATATTGGTTCAGGTTATGATTACAAGAAGTGCATTGGTTTGAAAGTGAAGCCACGGCAAGGTGATGgacttttgttttattcattacTGCCAAATGGCTTGATTGACAAGACTTCTCTTCATGGAAGCTGTCCGATGATTAAAGGAGAGAAATGGGTCGCAACAAAGTGGATTAGAAATCAATCTCAAGAGGACTA 857 0.4049 MKAKAKSSKLKLGLPTLLVLCSVFLFAGFFLSTLLFQDLGDVRPRLRILEESTAKGYDALAHGKTGDPFVGSIPLQVLSWKPRALYFPNFTSPELCERIIEMAKSKLEPSKLALRKGETDDSTQGTRTSSGTFISASEDKTGILDFVERKIAKVTMLPKNHGEAFNVLRYELGQKYDSHYDAFDPSEYGPQRSQRMASFLLYLSNVEEGGETMFPFEDGLNIGSGYDYKKCIGLKVKPRQGDGLLFYSLLPNGLIDKTSLHGSCPMIKGEKWVATKWIRNQSQED 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00367 285 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 160 280 IPR005123 -
Bva13g00367 285 PANTHER 4-HYDROXYLASE ALPHA SUBUNIT, PUTATIVE-RELATED 3 284 - -
Bva13g00367 285 SMART p4hc 82 279 IPR006620 GO:0005506|GO:0016705|GO:0031418
Bva13g00367 285 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 3 284 IPR045054 -
Bva13g00367 285 Gene3D q2cbj1_9rhob like domain 75 279 - -
Bva13g00367 285 Pfam 2OG-Fe(II) oxygenase superfamily 165 279 IPR044862 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00367 Bva-Chr13 1710737 1713998 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00367 K00472 - gmx:100811068 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00545 08 2797349 2802308 Bva13g00367 13 1710737 1713998 BWGD
Bva13g00367 13 1710737 1713998 Bva13g00367 13 1710737 1713998 ECH