Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00362 ATGGCGACTATGTCTTTGGGGCTCTTCTCCAGCTTTCTCACCGGCGAGACGGCGTCGTTCGTCGTCGTTCCCTCATCCTCTTCTCTGAGGCTTGTTCTCGCTCGAACATCTGCTAGCTTGCGCTCGGCGCGGACTGTTACCTCTGCTACTGTGTCACAAGACTCACAACCCTCCAGTGGGAAGCAGCCACGAGGAATCATGAGGCCCCGTAGAATCTCTCCCGAAATGCAAGCCCTCGTTGGGGTTGCGGAGATTTCTCGAACGCAAGCTCTCAAGCTGATTTGGGCCCACATTAAGGAGAATAATCTTCAGGATCCTGAAAACAAGAAGATAATCATTTGTGATGAGAAACTgaagaatatatttaagaaagacCAAGTTGGGTTTCTTGAGATTGCAGGATTGATTACCCCTCATTTCCTCAAATG 428 0.4813 MATMSLGLFSSFLTGETASFVVVPSSSSLRLVLARTSASLRSARTVTSATVSQDSQPSSGKQPRGIMRPRRISPEMQALVGVAEISRTQALKLIWAHIKENNLQDPENKKIIICDEKLKNIFKKDQVGFLEIAGLITPHFLK 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00362 142 Gene3D SWIB/MDM2 domain 60 142 IPR036885 -
Bva13g00362 142 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 4 142 - -
Bva13g00362 142 PANTHER PROTEIN TRI1-LIKE 4 142 - -
Bva13g00362 142 Pfam SWIB/MDM2 domain 69 140 IPR003121 -
Bva13g00362 142 ProSiteProfiles SWIB/MDM2 domain profile. 65 142 IPR003121 -
Bva13g00362 142 SUPERFAMILY SWIB/MDM2 domain 59 142 IPR036885 -
Bva13g00362 142 MobiDBLite consensus disorder prediction 45 62 - -
Bva13g00362 142 SMART swib_2 66 142 IPR019835 -
Bva13g00362 142 CDD SWIB-MDM2_like 70 140 - -
Bva13g00362 142 MobiDBLite consensus disorder prediction 45 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00362 Bva-Chr13 1697937 1699978 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Bva13g00362 SWIB 6e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00362 - - jre:108996408 157.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00362 13 1697937 1699978 Bva13g00362 13 1697937 1699978 ECH