Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00358 ATGGCGGTAGATTCATCTCTTTCATCCCCACTCGGTCCCCCTGCATGCGAGAAAGATGCCAAAGCGCTTCAATGCATCGAGGAAATGACCCGAAATGCCGACATCGTTCAAGACAGCGTCTTGGCCGAGATATTGACCCGAAACGCCGACACAGAGTACCTTAAACGCTTCAAACTCGGTGGTGCCACCGACCGCGATACCTTCAAATCCAAAATCCCCGTTATCACGTACGAGGATGTCCAACCTGAAATTCAGCGAATTGCCAATGGCGATCGCTCTGCAATTCTCTCTGCTCATCCTATCTCAGAATTCCTCACAAGttcTGGAACTTCAGCCGGAGAAAGGAAGCTCATGCCCACAATTAAGGAAGAGCTAGATCGCCGCCAACTGCTCTACAGCCTTCTCATGCCAGTAATGAACCTttaTGTGCCCGGTTTGGACAAAGGCATGGGCCTGTACTTTTTGTTCGTCAAGTCCGAAACAAGGACACCGGGTGGGCTCCTGGCCCGACCGGTTCTGACCAGCTACTACAAGAGTGACCATTTCAAGACCCGGCCCTACGACCCGTACACGGTGTACACCAGCCCCAACGAAGCCATTCTATGCCCCGATTCGTTCCAGAGCATGTACACTCAGATGCTGTGCGGACTTCTGGAGCGCAAACAAGTTCTACGTCTGGGAGCGGTCTTCGCCTCTGGTCTTATACGTGCAATCAAGTTCCTCCAACTCAACTGGCCCCAACTAGCCCATGATATCCGAACCGGAACCTTGAGCTCCAAAATCACCGACCCGGAGATTAAGAGCTGCATGGCGGATATGCTAAGACCCGTCCCAGAATTGGCATCGTTTGTGGAGCGAGAATGTAGCGTGGAAAATTGGGAGGGAATCATCACGAGAATTTGGCCAAACACCAAATACCTGGATGTAATCGTCACCGGAGCTATGGCTCAGTACATTCCAACGTTGAATTACTATAGCGGCGGGTTACCCCTCGCCTGCACCATGTACGCTTCATCCGAGTGTTATTTTGGACTCAATCTCAATCCCATGTGCAaaccctccgaagtttcctaCACAATAATGCCAAACATGGCCTACTTCGAGTTCCTACCCAACGAACCCGGATCGTCCGGGTTCACCCGTGACTCGCCACCAAAACTCGTTGACCTTGTTGATGTTGAAGTGGGGAAAGAGTATGAACTTGTTATCACAACCTATGCTGGGCTGTACAGATACCGAGTGGGTGACATCCTCCGAGTCACCGGGTTCCATAACTCGGCCCCACAATTCCATTTTGTAAGAAGGAAGAACGTGCTACTCAGCATTGACTCGGACAAAACCGACGAGGCCGAGTTGCAGAAGGCCGTGGAGAACGCGTCCAAGCTCCTAGCAGAGTTCAACACCAGCGTTGTTGAGTACACCAGCTATGCTGATACAACGACAATTCCGGGTCACTACGTCATATACTGGGAGCTTCTAGTGAAAGACCCATCCAACTCGCCCAGCGATGAGATTCTGAATCGGTGTTGTTTGGAAATGGAGGAATCACTAAACTCGGTTTACAGACAAGGCCGGGTGGcagaccattcaatcggtgcATTGGAAATCCGAGTAGTGAGGAACGGCACATTTGAGGAGTTAATGGATTATGCAATCTCGCGAGGGGCGTCTATCAACCAGTATAAGGTGCCGAGGTGTGTGAATTTTACTCCAATAATGGAGCTCTTAGATTCCAGGGTTGTCTCGTCACATTTCAGCCCAGCTTTGCCACATTGGACTCCAGAAAGGAGAAGGTA 1796 0.4961 MAVDSSLSSPLGPPACEKDAKALQCIEEMTRNADIVQDSVLAEILTRNADTEYLKRFKLGGATDRDTFKSKIPVITYEDVQPEIQRIANGDRSAILSAHPISEFLTSSGTSAGERKLMPTIKEELDRRQLLYSLLMPVMNLYVPGLDKGMGLYFLFVKSETRTPGGLLARPVLTSYYKSDHFKTRPYDPYTVYTSPNEAILCPDSFQSMYTQMLCGLLERKQVLRLGAVFASGLIRAIKFLQLNWPQLAHDIRTGTLSSKITDPEIKSCMADMLRPVPELASFVERECSVENWEGIITRIWPNTKYLDVIVTGAMAQYIPTLNYYSGGLPLACTMYASSECYFGLNLNPMCKPSEVSYTIMPNMAYFEFLPNEPGSSGFTRDSPPKLVDLVDVEVGKEYELVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIDSDKTDEAELQKAVENASKLLAEFNTSVVEYTSYADTTTIPGHYVIYWELLVKDPSNSPSDEILNRCCLEMEESLNSVYRQGRVADHSIGALEIRVVRNGTFEELMDYAISRGASINQYKVPRCVNFTPIMELLDSRVVSSHFSPALPHWTPERRR 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00358 598 Pfam GH3 auxin-responsive promoter 26 569 IPR004993 -
Bva13g00358 598 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.2-RELATED 5 598 - -
Bva13g00358 598 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 5 598 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00358 Bva-Chr13 1675753 1678114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00358 6 586 EF-hand Containing Proteins AT1G23160 50.085 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00358 K14487 - tcc:18608039 1085.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00358 13 1675753 1678114 Bva13g00358 13 1675753 1678114 ECH
Bva13g00358 13 1675753 1678114 Bva14g00441 14 2151915 2154144 ECH