Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00354 atgcagTCGAATGTGGGGCTTCTCGCTTCACATTCGAAGCTAATGCATCTGCTTCATCCACTAACTCCTCCTTCACCTGCTCTCCACCAACTCTATAGAATTACTAACACTTTCCCCGTCctgatatttattattctcttcctctctcacGCACTAGTAGCGTCTCCTTCTCAGCAAGCCTTGGCAGCTCCTTTAAGGGAAGATGGAGAGAGGGTTCTGATGAACAGAACcccaaagaaaaatgggtgGAACCCAAGTTTAGTGGAAGCTCAGGATGAGTCTAGGCCTTTAAAGGTTACATTTTCTGGGCCTGCTAGGAATTGGACCGATGCCATCCCCATTGGCAATGGGCGCCTTGGTGCCATGGTTTGGGGTGGTGTAGCATCAGAGATTCTTCAGCTCAATGAGGACACTCTTTGGACTGGGATTCCTGCCGACTACACAAACAAAAGCGCTCCAGATGCACTGGCTGAAGTCAGAAAACTTGTTGATGATGGCAAATATCCTGAAGCTACGGCAGCAGCTGTCAAGTTGTCAGGAGACCCTTCTGATGTTTACCAACTTCTTGGTGATATCTTGTTGGAGTTCGATGGGTCTCATCTTGCATATTTAGAAGAAACTTATCACAGGGAGTTAGATTTGGATACTGCAACAGTGAAAGTAAAATACTCTGTTGGTGATATAGAATTTACCAGAGAACATTTTGCTTCTAATCCTGATCAAGCAATAGTGACAAGGATTTCTGCAAGCAAGTCAGAGTCGTTATCATTTACAGTGTCTCTGGATAGTAAATTACATCATAATTCACGAGTAAGTGGTCAAAATCAGATAATAATGGAAGGAAGTTGTCCAGGCAAGAGGCTCCCACCAAAAGTGTATTCAAAGGGAAAGCCAAAGGTTACAAGAATAAAACATGATAATCCAAAGGGAATTCAGTTTTCTGGAGTTCtcaatttacaaattagtAAAGGGGTTATTCATGTTTTGGATGGCAAGAAGCTAAGAGTTGAAGGTTCAGATTCGGCTGTTTTGGTTCTgacagcttcttcttcttttgatggGCCATTTACCGATCCTAAAGACTCTAAGAAGGATCCTACTTCTGAGTCCCTCAGTAAAATGAAGTCAACAAAAACTTTTTCGTACTCTGATCTTTATGCGCGTCACTTGGTTGACTATCAGAGTCTATTTCATCGTGTCTCATTGCAGCTTTCTAAAACCTCCAACAGTGTTGTAGGAAGAACTATTATGAAACCAGATTCCTCAATCAATAGCATTTCTCAGAGGGGAGGTGATGATACTGTTCCAACTGCAGAAAGGATCAAATCATTTCAAACTGATGAAGATCCTTCTTTTGTGGAGCTTCTATTTCAGTATGGTAGATATCTACTAATCTCTTGTTCACGGCCTGGAACTCAGGCGGCTAACCTTCAGGGTATATGGAACAAAGACATTGAGCCTGCATGGGATGGTGCTCCTCACACAAACATCAATCTTCAAATGAATTATTGGCCATCCCTTCCTTGCAATCTTCGTGAGTGCCAAGAGCCATTATTTGATTACATTTCCTCTTTGTCAGTTAATGGAGCTAAAACTGCCAAgGTGAACTATGAAGCAAATGGTTGGGTTGTGCACCAAGTGTCTGATATATGGGCAAAAACATCCCCAGATCGAGGTGAGGCTGTATGGGCTCTGTGGCCAATGGGTGGAGCTTGGCTTTGTAGCCACCTGTGGGAGCATTATACTTACACAATGGATAAagattttctaaaaaataaagcatatcCTTTATTGGAAGGGTGTACATCATTCTTGTTGGATTGGTTGATTGAAGGCCGTGGTGGACTATTGGAAACCAACCCATCAACCTCCCCAGAGCACATGTTCATTGCTCCGGATGGAAAGCCTGCTAGTGTTAGCTACTCATCAACCATGGACATgtcaataataaaagaagttttCTCTGCaattctttctgcttctgAGGTATTGGGAAGAAATAATGATACTATTATCAAAAGAGTTATTCAGGCTCAGCCTAAGCTTTTACCGACTAAAATTGCTAGTGATGGTTCTATTATGGAATGGGCACAAGAATTTCAGGATCCGGAGGTACATCATAGACACGTGTCGCACCTCTTCGGCCTATTTCCGGGGCACACAATAAATCTTGGGGAAACTCCTGAGCTCTGTAAAGCTGCAGAGCATACTCTGAATAAAAGAGGAGAGGATGGTCCAGGGTGGTCAACTACTTGGAAGGCTGCATTGTGGGCACGTCTTCACAACAGTGAACATGCATATCGCATGGTTAAACACTTGATTATACTGGTGGACCCTGATCACGAGGCTAATTATGAAGGGGGACTTTACAGTAACCTGTTCACCACACATCCACCGTTCCAGATTGATGCTAACTTTGGGTTTTCGGCCGCAGTTGCAGAAATGCTTGTTCAAAGCACAATGAAGGACCTCTACTTACTTCCAGCTTTGCCCCGGGATAAATGGCCTGATGGTTGTGTAAAAGGATTGAAAGCACGTGGCGGGGTGACAGTCAACATGTGCTGGAAAGGAGGGGACCTGCAGGAATCTGGTCTTTGGTCAGAAAACCAGAATACCCAAATGAGATTACATTATAGAGGAACTACAGTCCAAGCCAAATTTTCTGCTGGCAGAGTTTACTCATTCAATAACCAGTTGAAGTGTGTAAAGACATATTCCCTTACCGAAGTGAAACCTTG 2738 0.4131 MQSNVGLLASHSKLMHLLHPLTPPSPALHQLYRITNTFPVLIFIILFLSHALVASPSQQALAAPLREDGERVLMNRTPKKNGWNPSLVEAQDESRPLKVTFSGPARNWTDAIPIGNGRLGAMVWGGVASEILQLNEDTLWTGIPADYTNKSAPDALAEVRKLVDDGKYPEATAAAVKLSGDPSDVYQLLGDILLEFDGSHLAYLEETYHRELDLDTATVKVKYSVGDIEFTREHFASNPDQAIVTRISASKSESLSFTVSLDSKLHHNSRVSGQNQIIMEGSCPGKRLPPKVYSKGKPKVTRIKHDNPKGIQFSGVLNLQISKGVIHVLDGKKLRVEGSDSAVLVLTASSSFDGPFTDPKDSKKDPTSESLSKMKSTKTFSYSDLYARHLVDYQSLFHRVSLQLSKTSNSVVGRTIMKPDSSINSISQRGGDDTVPTAERIKSFQTDEDPSFVELLFQYGRYLLISCSRPGTQAANLQGIWNKDIEPAWDGAPHTNINLQMNYWPSLPCNLRECQEPLFDYISSLSVNGAKTAKVNYEANGWVVHQVSDIWAKTSPDRGEAVWALWPMGGAWLCSHLWEHYTYTMDKDFLKNKAYPLLEGCTSFLLDWLIEGRGGLLETNPSTSPEHMFIAPDGKPASVSYSSTMDMSIIKEVFSAILSASEVLGRNNDTIIKRVIQAQPKLLPTKIASDGSIMEWAQEFQDPEVHHRHVSHLFGLFPGHTINLGETPELCKAAEHTLNKRGEDGPGWSTTWKAALWARLHNSEHAYRMVKHLIILVDPDHEANYEGGLYSNLFTTHPPFQIDANFGFSAAVAEMLVQSTMKDLYLLPALPRDKWPDGCVKGLKARGGVTVNMCWKGGDLQESGLWSENQNTQMRLHYRGTTVQAKFSAGRVYSFNNQLKCVKTYSLTEVKP 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00354 912 Gene3D - 338 816 IPR012341 GO:0005975
Bva13g00354 912 PANTHER - 67 910 - -
Bva13g00354 912 SUPERFAMILY Six-hairpin glycosidases 364 862 IPR008928 GO:0005975
Bva13g00354 912 Pfam Glycosyl hydrolase family 65, N-terminal domain 101 354 IPR027414 -
Bva13g00354 912 PANTHER ALPHA-L-FUCOSIDASE 2 67 910 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00354 Bva-Chr13 1650840 1656488 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00354 K15923 - gmx:100810387 1382.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00354 13 1650840 1656488 Bva13g00354 13 1650840 1656488 ECH