Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00329 ATGCCAAAACTTGCTCTATTCCTTGTTTGGTTTTGTCTGTTTCAGACAAGCAATTTGGTGGTGCAGGCCCTCACTTCAGCGTCAGACATTTCAGCTCTCAAGGCTTTCAAAGCTTCCATTAAACCCTCTTCTATCAAACCCTGGTCGTGCCTGGGATCCTGGAACTTCAGCGTTGATCCCTGTTCACTCCCACGACGCAGCTACTTCACCTGTGGCCTCACCTGCACCCCCGACTCCACTCGGATCAACCAAATAACCCTGGACCCGGCTGGTTACTCAGGCACGCTCACCCCTCTTGTTTCTCAACTCACCCAACTCGCCATCCTTGACCTTGCTGATAACTCCTTCTTCGGCCCTATTCCCTCTTCGCTCTCTTCACTTTCCAACCTCCAAACATTAACACTCCGATCTAATTCCTTTTCTGGCTCAATCCCTTCCTCCATAACCAGCCTCAAGTCTCTGGAGACTCTCGACCTTGCGTACAATTCCCTATCCGGGTCTCTCCTAAACTCCATGAATTTCCTCACTAGCCTGAGAAGAATTGATCTGAGCTTCAACAAGCTAACTGGGTCAATCCCGAAACTCCCACCAAACCTGCTAGAACTTGCGGCCAAGGGGAATTCTTTATCTGGGCCTCTCTATAAATCCTCCTTCGACGGGTTGAATCAATTGGAAGTAGTGGAGCTCGGCGAGAACGCATTCGCCGGAACACTTGAAAGCTGGTTCTTTCTCTTACCGTCCCTGCAACAAGTAGATTTGGCGAATAACAGTTTCACTCGTATCGAGATCACGAAACCCGCGGGTAGTAATAGTAACTTGATTGCTGTAAATCTGGGTTTCAACAAAATTCAGGGGTACGTCCCCGTGAATTTCGCTTCATATCCTCTGCTTTCGTTTCTGTCAATTCGTTATAATGCGCTACGTGGCACCATCCCATTAGAGTACAGTCAGAATAAGTCAATGAGAAGATTATTCTTGGACGGAAATTTCCTGATAGGGAAGCCGCCAGCGGGTTCTTCGCCGGCAGCGGATCAGTTTCCGGCAGCCTGGGGGACAATTGCCTGCAGAACTGCCCAGGATCATCACAGCTGTGCACGCCTGCCCAGAAACCCAGCTCAGTTTGCAAGCAAGCCTACCGTGGAAAACCAAGGCAATAGTGTCggttg 1166 0.494 MPKLALFLVWFCLFQTSNLVVQALTSASDISALKAFKASIKPSSIKPWSCLGSWNFSVDPCSLPRRSYFTCGLTCTPDSTRINQITLDPAGYSGTLTPLVSQLTQLAILDLADNSFFGPIPSSLSSLSNLQTLTLRSNSFSGSIPSSITSLKSLETLDLAYNSLSGSLLNSMNFLTSLRRIDLSFNKLTGSIPKLPPNLLELAAKGNSLSGPLYKSSFDGLNQLEVVELGENAFAGTLESWFFLLPSLQQVDLANNSFTRIEITKPAGSNSNLIAVNLGFNKIQGYVPVNFASYPLLSFLSIRYNALRGTIPLEYSQNKSMRRLFLDGNFLIGKPPAGSSPAADQFPAAWGTIACRTAQDHHSCARLPRNPAQFASKPTVENQGNSVG 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00329 388 SUPERFAMILY L domain-like 26 336 - -
Bva13g00329 388 MobiDBLite consensus disorder prediction 369 388 - -
Bva13g00329 388 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Bva13g00329 388 SMART LRR_typ_2 245 268 IPR003591 -
Bva13g00329 388 SMART LRR_typ_2 175 202 IPR003591 -
Bva13g00329 388 SMART LRR_typ_2 127 151 IPR003591 -
Bva13g00329 388 Gene3D Ribonuclease Inhibitor 26 197 IPR032675 -
Bva13g00329 388 PRINTS Leucine-rich repeat signature 175 188 - -
Bva13g00329 388 PRINTS Leucine-rich repeat signature 154 167 - -
Bva13g00329 388 Gene3D Ribonuclease Inhibitor 198 343 IPR032675 -
Bva13g00329 388 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 10 340 - -
Bva13g00329 388 Pfam Leucine rich repeat 246 307 IPR001611 GO:0005515
Bva13g00329 388 Pfam Leucine rich repeat 128 188 IPR001611 GO:0005515
Bva13g00329 388 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 10 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00329 Bva-Chr13 1547545 1549378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00329 94 338 Receptor kinase-like Gene Family AT5G65700 31.301 4.47e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00329 - - gmx:100780948 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00329 13 1547545 1549378 Bva13g00329 13 1547545 1549378 ECH