Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00326 ATGTCGATATCTGGGATTCAAGGCCATCTTCTTGAGGTTACTGTCGTAGGATGTAACAAGTTGAAGGACACAGAATGGATTTCAAGACAGGACCCTTATGTCTGTCTGGAATATGGTAGCACCAAGTTCCGAACCCGAACGCACACAGATGGCGGGAAAAACCCCGTATTTCAAGAGAAGTACATATTTTCTCTGATTGAAGGACTTAGGGAGCTCAATGTAATTGTTTGGAATAGCAATACGCTCACTTACGATGATTTTATCGGCAGCGGAAAGGTTCAATTGTACAAGGTTCTCTCACAAGGTTTTGATGACTCCGCATGGCCAATTCAAACCCAAACTGGCAGACATGCAGGTGAAGTAAAACTTATGATGCACTATGCAAATTCCAATGTCAATAAACATTCATCAAAGTTAACATCAAGCTATGCGCCATCAGCACCAGCATATGCACCGCCACCAAATCCCCAAGTCCATCTATATTCTGCACCACCTGCTAAGTCTTACCCACCACAAGCTTCTGCCCCATCTTATCCGCCAATTGCCACCGCTTACCCTGCCTCGTCTTCCTATCCTCCATATTCATCTGCCTATCCTCCACCACCATACCCTCCTCCTCCAGCTGCCTATCCTCCCCCTCCATACCCACCAACTTCAGCGTATCCTCCATCTCCATATCCACCACCATCTAATCATTATCCTCCCGGTCCGTATCCTGGAGTCTACCCACCACCGTATTG 740 0.4676 MSISGIQGHLLEVTVVGCNKLKDTEWISRQDPYVCLEYGSTKFRTRTHTDGGKNPVFQEKYIFSLIEGLRELNVIVWNSNTLTYDDFIGSGKVQLYKVLSQGFDDSAWPIQTQTGRHAGEVKLMMHYANSNVNKHSSKLTSSYAPSAPAYAPPPNPQVHLYSAPPAKSYPPQASAPSYPPIATAYPASSSYPPYSSAYPPPPYPPPPAAYPPPPYPPTSAYPPSPYPPPSNHYPPGPYPGVYPPPY 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00326 246 Gene3D C2 domain 9 129 IPR035892 -
Bva13g00326 246 CDD C2 11 108 - -
Bva13g00326 246 SMART C2_3c 10 107 IPR000008 -
Bva13g00326 246 Pfam C2 domain 10 99 IPR000008 -
Bva13g00326 246 PANTHER CONSERVED SERINE PROLINE-RICH PROTEIN (AFU_ORTHOLOGUE AFUA_2G01790) 3 245 - -
Bva13g00326 246 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
Bva13g00326 246 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 129 IPR035892 -
Bva13g00326 246 PRINTS Proline rich extensin signature 146 158 - -
Bva13g00326 246 PRINTS Proline rich extensin signature 164 180 - -
Bva13g00326 246 PRINTS Proline rich extensin signature 193 205 - -
Bva13g00326 246 PRINTS Proline rich extensin signature 207 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00326 Bva-Chr13 1528059 1530364 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00326 - - ming:122083600 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00326 13 1528059 1530364 Bva13g00326 13 1528059 1530364 ECH