Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00317 ATGAGTAGCCATGACCATGAGCTGCATTTGGCTTTCTTTCCCTTTATGGCTCATGGCCATATGATACCAACCATAGACTTAGCCAAACTGTTTGCTTCTCGAGGCCACAAAGCAACATTGATAACCACTCCTAACAATGCAGACTTTTTCGCCAAATCAATATACAAAAGCCAACAACTGGGTCACCAAATTTCACTTATTTCTGTGAAATTCCCTTCAGCAGAAGTGGGGTTACCCGAAGGATTTGAGTCCCTTAGCTTAGGTTCTTCCCCTGACTTGTACCAGAAATTCCTCAAGGCCATACCATTGTTGGAAAAGCCGCTTGATGAACTACTCCAGAAGCACCGCCCACATGTTCTTGTGGCCGACACCTTATTTTCATGGGCTACAGATCTTGCTGCTAAATATGGGATTCCAAGGCTCATTTTTCATGGAACTTGCAACTTCTGTGTATGTGCTTCCCTATGTTTGAGTATGTATAAGCCATACAAGAAGGTATCATCTGATTCAGAGGATTTTGTTTTGCCAAATCTTCCTAATGAGATCAAGTTTTCAAGGAATCAGATACCATCTTTCATTATGCAGGAAGGAGAAACAGAGGTTTCTAAGGTGTTTAGAGCTTCTGTGGAATCCATATACCGAAGCTATGGGACTGTGTTTAACAGCTTCTATGAGCTCGAGGGGGCTTATACAGATTACTACAGGAACGTACTTGGGAGGAAATGTTGGAATATAGGCCCTGTTTCACTAACAAATATGGACCCTGAAGAGAAAGCATACAGGGGAGAAGCTTCAACCGTTGACCATGGATGTCTAAAGTGGCTAGACACTAAGAAACCCAACTCGGTTGTCTATGTATGCTTCGGAAGCAAACAAAAGTTCACTAATGAACAGCTAAAGGAAATTGCTTTGGGTCTTCAGGCATCTGGGCAGCAATTTATTTGGGTTGTGAAAAAGGATAAGAAAGATGAAGGAAATGGAACATGGCTACCTGAAGGATTTGAAAAAAGGAACGAAGGGAAGGGTTTAGTTGTGAGAGGATGGGCTCCCCAATTGTTGATTCTAAGTCACGAAGCCGTGGGAGGTTTTGTGACCCACTGTGGATGGAACTCTATATTGGAAGCTGTGTCTGCTGGGGTGCCTATGGTTACTTGGCCCATGGTTGCAGATCAATTTTTCAATCAGAAATTGGTGACTCAAGTTCTTATGATTGGGATTGAAGTTGGGATTCAATGGGTTGGAGACAGTGCCAAGAAGGATGCCATAAAAATGGCAGTAACTCAGATTACAGCAGGGGAAGAAGCAGAGGAACTGAGAAACAGGGCAAGGGCACTTGCAGAAACGGCCAAGAGAGCTTTTGCCGAGGGAGGATCATCTTTTAATGACTTGAACTCTTTACTTGAAGAGTTGGCGTCTTTAACTAATGACAAGTCTCTGTTTCCATG 1445 0.4318 MSSHDHELHLAFFPFMAHGHMIPTIDLAKLFASRGHKATLITTPNNADFFAKSIYKSQQLGHQISLISVKFPSAEVGLPEGFESLSLGSSPDLYQKFLKAIPLLEKPLDELLQKHRPHVLVADTLFSWATDLAAKYGIPRLIFHGTCNFCVCASLCLSMYKPYKKVSSDSEDFVLPNLPNEIKFSRNQIPSFIMQEGETEVSKVFRASVESIYRSYGTVFNSFYELEGAYTDYYRNVLGRKCWNIGPVSLTNMDPEEKAYRGEASTVDHGCLKWLDTKKPNSVVYVCFGSKQKFTNEQLKEIALGLQASGQQFIWVVKKDKKDEGNGTWLPEGFEKRNEGKGLVVRGWAPQLLILSHEAVGGFVTHCGWNSILEAVSAGVPMVTWPMVADQFFNQKLVTQVLMIGIEVGIQWVGDSAKKDAIKMAVTQITAGEEAEELRNRARALAETAKRAFAEGGSSFNDLNSLLEELASLTNDKSLFP 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00317 481 Coils Coil 435 455 - -
Bva13g00317 481 PANTHER GLYCOSYLTRANSFERASE 4 472 - -
Bva13g00317 481 CDD GT1_Gtf-like 8 449 IPR002213 GO:0008194
Bva13g00317 481 Gene3D Glycogen Phosphorylase B; 1 271 - -
Bva13g00317 481 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 472 - -
Bva13g00317 481 ProSitePatterns UDP-glycosyltransferases signature. 348 391 IPR035595 -
Bva13g00317 481 PANTHER GLYCOSYLTRANSFERASE 4 472 - -
Bva13g00317 481 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 238 401 IPR002213 GO:0008194
Bva13g00317 481 Gene3D Glycogen Phosphorylase B; 272 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00317 Bva-Chr13 1495635 1497400 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00317 4 470 Glycosyltransferase AT2G15490 49.896 2.11e-168 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00317 K23260 - tcc:18607969 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00317 13 1495635 1497400 Bva13g00317 13 1495635 1497400 ECH