Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00315 ATGGGTTCGATTAATTTGACTTATACTCCTTTCAGCTCCGTTTTTCTACACCAACGTCAATGCGTTTCTTCACGCGCTACTCCGGCCTTCCAACGGTGCCGTTTCTCTTCTTCGAGTTGTTTCGGCGGGGCTAGCTCCACGGTGGTGTCTTCTTTATCTGGTTTAAGTTCCAAATCCGTCCCACGTAGAGATGGAACATATAAAGTTAGCGACTTTATGACAAAGAAGGTGAATTTACATGTTGTGAAAACCACCACCACGGTTGATGAAGCTTTGGAGATTCTCGTGGAGAACAGAATCGGTGGTCTTCCTGTAATTGACGATGAATGGAATGTGGTAGGTGTTGTTTCAGATTATGACTTGTTAGCAATTGATTCTATATCAGCTTTAGGTGGCAGTCAATGTGACACGGACTTGTTCCCCGACGTGGATAGTTCTTGGAAAGCATTCAATCGGATACAAAAGCTACTAAGTAAGACTAAGGGCAAAGTTGTTGGCGACTTGATGACACCATCTCCACTTTTTGTTGATGAATCGACCAATCTGGAAGATGCTGCCAGgATGTTGCTTGAAACAAAATATGGCCGACTACCTGTTGTAGACGATGACGGCAAGTTGGTTGGACTTATTACAAGAGGAACTATTGTTCGAGCAGCTCTGCAGACAAAACGATCTGGTGAATGGTA 686 0.4388 MGSINLTYTPFSSVFLHQRQCVSSRATPAFQRCRFSSSSCFGGASSTVVSSLSGLSSKSVPRRDGTYKVSDFMTKKVNLHVVKTTTTVDEALEILVENRIGGLPVIDDEWNVVGVVSDYDLLAIDSISALGGSQCDTDLFPDVDSSWKAFNRIQKLLSKTKGKVVGDLMTPSPLFVDESTNLEDAARMLLETKYGRLPVVDDDGKLVGLITRGTIVRAALQTKRSGEW 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00315 228 ProSiteProfiles CBS domain profile. 73 133 IPR000644 -
Bva13g00315 228 SUPERFAMILY CBS-domain pair 66 219 IPR046342 -
Bva13g00315 228 Gene3D - 64 226 IPR046342 -
Bva13g00315 228 Pfam CBS domain 165 218 IPR000644 -
Bva13g00315 228 Pfam CBS domain 69 123 IPR000644 -
Bva13g00315 228 ProSiteProfiles CBS domain profile. 169 225 IPR000644 -
Bva13g00315 228 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX2, CHLOROPLASTIC 37 225 - -
Bva13g00315 228 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX1, CHLOROPLASTIC-LIKE 37 225 - -
Bva13g00315 228 SMART cbs_1 78 126 IPR000644 -
Bva13g00315 228 SMART cbs_1 172 220 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00315 Bva-Chr13 1489957 1492338 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00315 - - gmx:100814621 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00315 13 1489957 1492338 Bva13g00315 13 1489957 1492338 ECH
Bva13g00315 13 1489957 1492338 Bva14g00393 14 1953631 1957248 ECH