Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00306 ATGGAGCAGGGACTAATTTTCGCTCcaacctttttcttcttcgtgGCTCTTCTTCTTGGTTCCTCCTTTGCTCTTAAGGAAGGACAAACATGTGTAGCAAACAGCAACTGCGACTCGGGCTTGCACTGCGAGACGTGTGTGGCAAATGGGAATGTGAGGCCAAGGTGTACCCGAATCCAACCCATTAATCCCACTTCAAAGGTGAAAGGATTGCCGTTTAACCGGTATTCATGGTTGACAACACATAATTCATTTGCCATTCTGGGGAAGAGATCGGCGACGGGTTCTTTGATTCTAGCTCCCACCAATCAGCAGGACACCATTACAGAACAACTCAATAATGGAGTAAGAGCTCTGATGCTTGACTTGTATGACTTCCAGAATGATATCTGGTTATGTCACTCATATGGTGGCCGGTGTTATAACTACACAGCTTTTCAACCTGCAATCAATGCTCTCAAAGAGGTTCAAGCCTTTCTTGAAGCAAACCCATCGGAGATTGTTACTATCATCATCGAGGATTATGTTACAACACCAAGAGGGTTGACAAAAGTGTTTGATGCTGCTGGCCTGAGAAAATACTGGTTTCCAGTAAATAGAATGCCAAAAAATGGTGGGGATTGGCCAACAGTGGATGACATGATCCAGAGCAACCAGCGTTTGCTAGTTTTCACCTCAAAATCATCTAAAGAAGCTTCAGAAGGAATAGCCTATCAGTGGAGATACATGGTAGAAAACCAATATGGGGATGGAGGAATGAAAGCTGGTTCGTGCCCAAATCGTGGCGAATCACCAGGGATGGACACAAAATCAAGATCTTTAGTGTTAGTGAACTTCTTCCGAGATCTCCCAGACGTAACTCAATCTTGCAAGGACAATTCAGCACCCTTACTTGACATGATTAACACCTGCTACGAAGCAGCAGGCAAAAGATGGCCTAACTTTATAACCGTTGATTTCTACAAGAGGAGCGATGGTGGAGGAGCACCAGAAGCAGTGGATGTTGTTAATGGTCATCTAATATGCGGCTGTGGAAACATTGCCACCTGCAAGACAAACATGACGCATGGTTCGTGTCAATTACCCGTGGCTGAAGTTACCCCTGCATCAAATACCTCCTCTGCATTTAGCTATCAAAACTGCAGAATACTTGTACTGTGGTGCTTGTTAGGCACACTTTTTGTGGCCAAGCTCATTTCATTCTA 1205 0.439 MEQGLIFAPTFFFFVALLLGSSFALKEGQTCVANSNCDSGLHCETCVANGNVRPRCTRIQPINPTSKVKGLPFNRYSWLTTHNSFAILGKRSATGSLILAPTNQQDTITEQLNNGVRALMLDLYDFQNDIWLCHSYGGRCYNYTAFQPAINALKEVQAFLEANPSEIVTIIIEDYVTTPRGLTKVFDAAGLRKYWFPVNRMPKNGGDWPTVDDMIQSNQRLLVFTSKSSKEASEGIAYQWRYMVENQYGDGGMKAGSCPNRGESPGMDTKSRSLVLVNFFRDLPDVTQSCKDNSAPLLDMINTCYEAAGKRWPNFITVDFYKRSDGGGAPEAVDVVNGHLICGCGNIATCKTNMTHGSCQLPVAEVTPASNTSSAFSYQNCRILVLWCLLGTLFVAKLISF 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00306 401 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 72 177 - -
Bva13g00306 401 SUPERFAMILY PLC-like phosphodiesterases 70 339 IPR017946 GO:0006629|GO:0008081
Bva13g00306 401 PANTHER UNCHARACTERIZED 11 377 - -
Bva13g00306 401 PANTHER PLC-LIKE PHOSPHODIESTERASES SUPERFAMILY PROTEIN 11 377 - -
Bva13g00306 401 CDD PI-PLCc_At5g67130_like 63 337 - -
Bva13g00306 401 Gene3D Phosphatidylinositol (PI) phosphodiesterase 63 328 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00306 Bva-Chr13 1439258 1441968 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00306 - - gmx:100819253 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00306 13 1439258 1441968 Bva13g00306 13 1439258 1441968 ECH