Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00302 ATGGCTTCATCTACTTCTTATTCTACAGCTTCTGCTCCATTTTCTCTGCCCCGCCCGCACGCCCTCCACGATCTCACTTCCTCTTTCTTCAACTCCTCGCGCCAGCTTAACCCTACACCTGGTTCCTCATTTCGTTTCCCTTTGCGGAGATCCCAAAAGGGGTTTAAGATTCAAAACCCACCTCTGCTGCCCAAGATTCAGTGCATCCGCGAAACCAGAGCTACACCAGTTACCAAAGACTCCTGGAAAAGTTCGATCCTGAACAGTGAAACCCCAGTCCTTGTGGAATTCTATGCTAGTTGGTGTGGCCCGTGCAGGATGGTACACCGGATAATTGATGAGATTGCAACAGAGTATGCTGGGAAGCTTAAATGCTTTGTACTCAACACAGACAACGATTTACAAATTGCCGAAGACTATGAAATCAGGGCTGTACCAGTGGTTTTGTTGTTTAAAAATGGTCAAAAATGTGACTCCGTAATTGGTACCATGCCAAAGGAGTTTTATGAAGCTGCCGTTGAGAGGGTGCTCAAGTCCTA 539 0.4694 MASSTSYSTASAPFSLPRPHALHDLTSSFFNSSRQLNPTPGSSFRFPLRRSQKGFKIQNPPLLPKIQCIRETRATPVTKDSWKSSILNSETPVLVEFYASWCGPCRMVHRIIDEIATEYAGKLKCFVLNTDNDLQIAEDYEIRAVPVVLLFKNGQKCDSVIGTMPKEFYEAAVERVLKS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00302 179 Gene3D Glutaredoxin 74 179 - -
Bva13g00302 179 TIGRFAM thioredoxin: thioredoxin 78 175 IPR005746 GO:0015035
Bva13g00302 179 CDD TRX_family 85 174 - -
Bva13g00302 179 ProSitePatterns Thioredoxin family active site. 94 112 IPR017937 -
Bva13g00302 179 Pfam Thioredoxin 76 169 IPR013766 -
Bva13g00302 179 PRINTS Thioredoxin family signature 101 110 - -
Bva13g00302 179 PRINTS Thioredoxin family signature 141 152 - -
Bva13g00302 179 PRINTS Thioredoxin family signature 93 101 - -
Bva13g00302 179 PANTHER THIOREDOXIN M3, CHLOROPLASTIC 55 178 - -
Bva13g00302 179 SUPERFAMILY Thioredoxin-like 72 177 IPR036249 -
Bva13g00302 179 ProSiteProfiles Thioredoxin domain profile. 48 178 IPR013766 -
Bva13g00302 179 PANTHER GEO12009P1 55 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00302 Bva-Chr13 1425901 1427861 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00302 K03671 - fve:101291125 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00302 13 1425901 1427861 Bva13g00302 13 1425901 1427861 ECH