Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00274 ATGGGCCCTCCCAAGACGACGGTTCGTACAATCTCGCAGGAAGCATTCGATGAGCTGGTGAAGGAGAACATAGATGACCTTGGAATGGACCCCGCCGAGGCTCTTCAAGATGCCATTGAAGCTCTCACTCTTCAAGGCGTTGATCTCTCTGgaATTATCACGTGCATTCCTGgagaaaataatgtaaaagatAACCCCATCATACAGTGTCTGAATGGGTTAAAGCAACTGGATTCTGAATTCGAGGACCAAATCCGTGATAAGAATTTAGACGGGATAGTGGAGCTTTTTGTTAAGCTTATTGAGTTGTGTGGTGCGGAAGGATCCGGGAATGCAGCAATTGCAACGAAGAACGGTGGGGTAGAATTGGTTTGCTCTATTTGTTCCAGAATACCCAACGGGTATGAGCTTGTTGTTGTTTCCGCTTTGAAGACTATGTCATCATTGCTTCACGACCTTCAAAGTACTGGAACTTTCCAGACCAGTAACGGTCCAAGTATCGTGATTGGCATCCTAAACGATAACAAGCAAAATTTAGGCATCTTAAATAGTGGTTTTGCTGTTGTAGCTTCAGCTGCAACTGGTAatgaaattgtcaagcaaTCATTCATGGAGTTGAAAGTGGATGAGTTAATTGTGGAGATAATGTCTATACACAAGAATGGTGACATCCAAAGTTTATATGATGCTATTCGTGTACTCCTGACACCTGATGATAATAGAGTTGTAGCTTCTCAAGTATATGGTTATGCAAGAAAACTTGCAAAGATTGGAATTGCAGAAGCCCTTGTGGATTCACTGCGTGCAGGACTTAGCTCGCCTGGTCTAGTTTCAGCAAGTATTGCTTTGAAGGCCGTTGCTGTTAATGATGAAATATGTAAATCCATTGCTGAAAAAGGTGGCATTGATGCAGTACTGAGATGTATAGATGACAGTGGTGAACAACGCAACAAATCTGTGGCCAGAGTTTGCTGCTCACTGCTTTCAAATTTGGCAGGAAGTGATTCAAATAAGAATGCAATTGTTGAGAAGGGGGGTATGGATAGGTTAATCAAGCTTTCAGCCAGATTTGCTGATGACCCTTCTGTCTTGCAAGAGGTTATGTCTATTATTTCTGTGCTTTCGTTGAGATCCCCTGAAAATGCCGCTCGTGCCATTGAAGCGGGTGCCGGCGATCTTGCTATTCAAGCTATGCAAAAATATCCTTTGGCACACCAAATGCAGAGAAACTCCTGCCTCATGATTAGAAACCTTGTGGTGAGAAATCCAGAAAACAGAACTATTCTGCTTAACAACGGAGTTGAGAAATATATACGCAAGGCCAAGCACAGCCATGATAACTGTAAGGAGGCCGCTACCGATGCGCTTAGGGATTTGGGGCTTGATGATTACAATCTATA 1400 0.4236 MGPPKTTVRTISQEAFDELVKENIDDLGMDPAEALQDAIEALTLQGVDLSGIITCIPGENNVKDNPIIQCLNGLKQLDSEFEDQIRDKNLDGIVELFVKLIELCGAEGSGNAAIATKNGGVELVCSICSRIPNGYELVVVSALKTMSSLLHDLQSTGTFQTSNGPSIVIGILNDNKQNLGILNSGFAVVASAATGNEIVKQSFMELKVDELIVEIMSIHKNGDIQSLYDAIRVLLTPDDNRVVASQVYGYARKLAKIGIAEALVDSLRAGLSSPGLVSASIALKAVAVNDEICKSIAEKGGIDAVLRCIDDSGEQRNKSVARVCCSLLSNLAGSDSNKNAIVEKGGMDRLIKLSARFADDPSVLQEVMSIISVLSLRSPENAARAIEAGAGDLAIQAMQKYPLAHQMQRNSCLMIRNLVVRNPENRTILLNNGVEKYIRKAKHSHDNCKEAATDALRDLGLDDYNL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00274 466 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 6 2 460 IPR040104 -
Bva13g00274 466 SUPERFAMILY ARM repeat 87 235 IPR016024 -
Bva13g00274 466 Gene3D - 68 466 IPR011989 -
Bva13g00274 466 SUPERFAMILY ARM repeat 260 460 IPR016024 -
Bva13g00274 466 SMART arm_5 422 461 IPR000225 GO:0005515
Bva13g00274 466 SMART arm_5 289 333 IPR000225 GO:0005515
Bva13g00274 466 SMART arm_5 334 376 IPR000225 GO:0005515
Bva13g00274 466 SMART arm_5 378 420 IPR000225 GO:0005515
Bva13g00274 466 PANTHER UNCHARACTERIZED 2 460 - -
Bva13g00274 466 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 300 346 IPR000225 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00274 K24166 - zju:107411265 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00274 13 1297183 1301459 Bva13g00274 13 1297183 1301459 ECH