Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00265 ATGAGCGCTTCCGCCTTCAGCTCGAATTCCTTTGCCAGAGGTTTCTCTCGGAAGGATGTGGAGAAGATATCCAAGGCGAGGAAGGCATATGAAGGGAAACCATTTGTTAAATGTTCGATGAAGACCACAAACCAGACTTCACAAAAGACGGTTCGTGTTGGTGTTCTTGGAGCTAGTGGGTACACTGGTTCTGAGGTTCTTAGGCTTTTGGCAAATCATCCACAATTTGGGGTTGCTGTGTTGACTGCTGACAGAAAAGCTGGGCAGCCAATTGCATCTGTATTCCCTCATTTGGGCACACAAAATTTGCCAGATTTGGTTTCAATTAAAGATGTAGATTTTTCTGATGTGGATGCCGTATTCTGTTGTTTGCCACATGGAACCACTCAGGAAATAATTAAAGGCCTGCCCAAGAACTTGAAGATTGTTGATCTTTCTGCAGACTTCCGGCTACGAGATATATCTGAGTATGAAGAATGGTATGGTCAGCCACACAGAGCACCAGACTTGCAGAAAGAAGTTGTATATGGATTGACAGAGATTTCAAGggaggaaataaaaaatgcacgCCTAGTTGCTAATCCTGGTTGTTATCCAACATCCATTCAGCTACCTCTTGCTAAGCTCCTTGATACTAGAAATATCATTATTGATTCAAAATCTGGTGTGAGTGGAGCAGGTCGTAGTGCTAAAGAATCATTGTTATTCACTGAAGTAACTGAAGGTATCTATTCTTATGGTGTCACCCGACACCGCCATgTTCCAGAAACTGAACAGGGACTCTCTGATGCCGCTTTTACAAAGATAACCATTAGTTTCACCCCTCACCTAATTCCAATGACTCGTGGTATGCAATCAACGATCTATGTTGAAATGGCTCCTGGAGTAGGAATTGAGGAATTGTACCAGCATCTGAAGCTTTCCTATGAGGATGAAGAATTTGTAGTGCTGTTGGAAAAAGGAATTGTTCCTCGAACTCATAGTGTTAAAGGAACTAATTATTGTTTGATCAATGTTTTTCCCGATCGTATTCCTGGAAGAGCAATTGTTATATCTGTTATAGATAATCTAATGAAGGGGGCTTCAGTAATTAGTTTATACTTGAAGATTAATGGAGTTGTAGAGTCAATATCAAGTCTAAAGCTGCAAGACGCAGTAACGCAGTTGAACCAGGGATATATACTAGAAACTAGACTAGACATTCTTCTCAGTATTGCAAACCCTACAGGAAAGGGTTtcgaaaattcaaaatttcatctttctaCATTCGACCATGGCAGCTCAGAGCGAAACCGTCATTTAGATATTCACTTCGCTTCAAGAAGGGCTTCTATGTTATCAAAAATGGCTACCTCATATCCGTCCTACCTTGTATCTACTTCTGCTCGCTTCCAACCATTAAGTAGCAACAATTTTGTCAGAACCCAATCTCCCTTTCTTCAGGGATTCAAGATTACATCATGCTTTGTCCAAAAGCGGAGGTGCAGTTCGAGCGCATCTAAGAAGACAGAGCCGCCCAAGATCTCCTGTGCAATGGATATGTCTGCACAACACTCGGATGatgatagtaaaataaaattggatcATCTAATAGACAAAGTGCAAAAACTTTGGGACAGTTCTCCTCAGCCAGTCAAGAATTTTCCTTGGAACAAAGCATTGGAGAATTTCATTCAACTTACACTTAATCTTATTTTGGCTGTTGTGAAGTATCTATCTGTACCTCTATTGGCGGTTTCCTCCCTTAGTGAGTTATCGTACTGTGCCCATGAAAGGAGGCTTTTTCTTGTTCCATTTCcagtaatctttggagctgcTGTTGCGGCAGTCTTAAAGGGGACTGCCTTGGAATTATCTCCACGTCTAAAGAATGCAGAAGCTCCGTGGCATTTGATTGCCATTGCAATTTTCTTCACGTTAATCAAATTGCCAGGCCCTTATTACCCTTATTGGGGACGCATACTTGTTCCTCACTTTGCAAATGGGGTACTGTGGAGAACTCTTTGGTTTGCAATCTTGTGGTATAGAAGGCCCCAAAAAGCGTTGAAGATGCCACATGCTGTAGATGATAGACATTCAACCTACTG 2087 0.402 MSASAFSSNSFARGFSRKDVEKISKARKAYEGKPFVKCSMKTTNQTSQKTVRVGVLGASGYTGSEVLRLLANHPQFGVAVLTADRKAGQPIASVFPHLGTQNLPDLVSIKDVDFSDVDAVFCCLPHGTTQEIIKGLPKNLKIVDLSADFRLRDISEYEEWYGQPHRAPDLQKEVVYGLTEISREEIKNARLVANPGCYPTSIQLPLAKLLDTRNIIIDSKSGVSGAGRSAKESLLFTEVTEGIYSYGVTRHRHVPETEQGLSDAAFTKITISFTPHLIPMTRGMQSTIYVEMAPGVGIEELYQHLKLSYEDEEFVVLLEKGIVPRTHSVKGTNYCLINVFPDRIPGRAIVISVIDNLMKGASVISLYLKINGVVESISSLKLQDAVTQLNQGYILETRLDILLSIANPTGKGFENSKFHLSTFDHGSSERNRHLDIHFASRRASMLSKMATSYPSYLVSTSARFQPLSSNNFVRTQSPFLQGFKITSCFVQKRRCSSSASKKTEPPKISCAMDMSAQHSDDDSKIKLDHLIDKVQKLWDSSPQPVKNFPWNKALENFIQLTLNLILAVVKYLSVPLLAVSSLSELSYCAHERRLFLVPFPVIFGAAVAAVLKGTALELSPRLKNAEAPWHLIAIAIFFTLIKLPGPYYPYWGRILVPHFANGVLWRTLWFAILWYRRPQKALKMPHAVDDRHSTY 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00265 695 Gene3D Dihydrodipicolinate Reductase; domain 2 195 356 - -
Bva13g00265 695 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 197 356 - -
Bva13g00265 695 SMART Semialdhyde_dh_3 52 189 IPR000534 GO:0016620|GO:0051287
Bva13g00265 695 Pfam Semialdehyde dehydrogenase, NAD binding domain 52 189 IPR000534 GO:0016620|GO:0051287
Bva13g00265 695 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 49 212 IPR036291 -
Bva13g00265 695 TIGRFAM argC: N-acetyl-gamma-glutamyl-phosphate reductase 51 363 IPR000706 GO:0003942|GO:0006526
Bva13g00265 695 Hamap N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 51 381 IPR000706 GO:0003942|GO:0006526
Bva13g00265 695 Pfam Semialdehyde dehydrogenase, dimerisation domain 205 359 IPR012280 GO:0008652|GO:0016620|GO:0046983
Bva13g00265 695 PANTHER N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE REDUCTASE, CHLOROPLASTIC-RELATED-RELATED 1 366 - -
Bva13g00265 695 PANTHER N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE REDUCTASE, CHLOROPLASTIC-RELATED 1 366 - -
Bva13g00265 695 Gene3D - 52 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00265 Bva-Chr13 1254798 1261810 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00265 K00145 - qsu:111991861 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00265 13 1254798 1261810 Bva13g00265 13 1254798 1261810 ECH