Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00264 ATGGGAGAGGTGGATCCAAGTTTCGTGCAAGCCCCAGAACATAGGCCAAAATCTTCAATAATCGTAGCCGAAGGCATCCCTTTGATTGATCTGACGCAAATAAAGTACCAAGACCAAGACACCCTCTTGGTCTCAGACCCAGTTGCCATTCAAGGCCTAGTTCAAGAAATAGGCAGTGCATGCAAGAACTGGGGATTTTTCCAGGTGATTAATCACGGTGTGCCTTTGGACAAGAGACAGAGGATCCAAGACGCTGCCAGCAAGTTCTTCTCAATGAGTTTGGAAGAGAAGCTGAAGGTGAGAAGAGATGAACTTAATGTTCTGGGTTATTTCGAGGCAGAGCATACTAAGAATGTCAAAGACTGGAAGGAAATCTATGATTTTAATGTGCAAGAACCCACTTTTATACCACCCTCTAGTGATGAAAATTCCATTCAATTCCAATGGGATAACCGATGGCCCCAGAATCCTCCTGAATTCAGAGAGGCTTGCAGAGATTATGCAGAAGAAGTGGAGAAACTGGCTTACAAGTTGATGGAAATCATTGCACTGAGCTTAGGCTTGGCACCAAACAAGTTCCGTGACTTCTTCAAACACAACACCAGTAACATACGACTCAATCACTACCCAGCTTGTCCTTACCCACATCTGGCTTTGGGTCTTGGACGACACAAGGATACTGGCGTTTTAACCGTTCTTGCTCAAGATGATGTTGGTGGTCTTGAAGTAAGGAGAAAATCAGATGGAGAATGGATCCGGGTCAAGCCCATCTAcaattctttcatcatcaatgTTGGTGATATGCTTCAGGTTTGGAGTAATGACGCTTATGAGAGTGTGGAGCACAGGGTTATGGTGAACTCTGAGAAGGATAGATTTTCCATTCCATTCTTTCTGAAACCAGCGCTTTACACTGATGTGAAGCCATTGGAAGAACTGATAGATGAGAAGAATCCCCCCAAGTATAAACCAATCAACTGGGGAAAGTTCCGTGCAACCAGACTTCttagtaattttgttaaatccAATGTTGAAAATCtccaaatttatcattttaagcTTTCCCAGTA 1070 0.4178 MGEVDPSFVQAPEHRPKSSIIVAEGIPLIDLTQIKYQDQDTLLVSDPVAIQGLVQEIGSACKNWGFFQVINHGVPLDKRQRIQDAASKFFSMSLEEKLKVRRDELNVLGYFEAEHTKNVKDWKEIYDFNVQEPTFIPPSSDENSIQFQWDNRWPQNPPEFREACRDYAEEVEKLAYKLMEIIALSLGLAPNKFRDFFKHNTSNIRLNHYPACPYPHLALGLGRHKDTGVLTVLAQDDVGGLEVRRKSDGEWIRVKPIYNSFIINVGDMLQVWSNDAYESVEHRVMVNSEKDRFSIPFFLKPALYTDVKPLEELIDEKNPPKYKPINWGKFRATRLLSNFVKSNVENLQIYHFKLSQ 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00264 356 SUPERFAMILY Clavaminate synthase-like 3 337 - -
Bva13g00264 356 Pfam 2OG-Fe(II) oxygenase superfamily 202 301 IPR044861 -
Bva13g00264 356 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 198 301 IPR005123 -
Bva13g00264 356 PRINTS Isopenicillin N synthase signature 224 245 - -
Bva13g00264 356 PRINTS Isopenicillin N synthase signature 289 307 - -
Bva13g00264 356 PRINTS Isopenicillin N synthase signature 57 74 - -
Bva13g00264 356 Gene3D - 1 340 IPR027443 -
Bva13g00264 356 PANTHER GIBBERELLIN-44 DIOXYGENASE-RELATED 2 346 - -
Bva13g00264 356 Pfam non-haem dioxygenase in morphine synthesis N-terminal 26 156 IPR026992 -
Bva13g00264 356 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 2 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00264 Bva-Chr13 1249266 1250603 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00264 26 339 Glycosyltransferase AT5G59530 32.727 4.52e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00264 - - gmx:100808372 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00264 13 1249266 1250603 Bva13g00264 13 1249266 1250603 ECH