Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00257 ATGAAGCCCGTGATAACTATTTATGATCTAATTGAAGAAGCCAAGATCAGAACTGTCTGGTGGGCTCTTTTTATATTCTCCATTGCGTATTTCTTAACTCATACGAGTAAATCAATGTGGATGAATATACCCATGTCAATTCTATTTGCTTCTGCACTGCGTTTTCTTGTCAATAATGTGGAGTTCCATTGGAAGGTTCAAGCACCTAGATCAGAGACATATTTATCCCATTTGGAGAAGAAACAGTTATCTCCGAATGATTCCCGAGTCTCTACTACATTGAACCCAGCAAAATGGAATAGGAAAATTGATTCTCCTATTGTGGAGAACGCCTTGGATGATTTCATGGACAAGTTATTGAAGGATTTTGTGGTGGACTTGTGGTATTCGGAAATTACTCCAGATAGAGAGGCTCCTGAGCTGATACGTGAAATAATCATGGATGCTCTTGGTGAAATATCAACAAGAGTGAAAGAGATAAACATTGTTGACTTGTTTACAAGGGATATAATTGATTTAGTAGGCGATCACTTTGAACTTTTCAGAAGAAATCAAGCTGCTATAGGTGTTGATGTTATGCTAACTTTATCTTCTGAAGAGAGGgatgaaagaattaaatatcaCTTATTGAATTCTAAGGAGCTTCATCCTGCTCTGATATCTCCTGAGAGTGAGTACAAGGTTCTTCAGCGGCTAATGGGTGGGGTATTAGGTACAGTACTAAGGCCACGTGAAGCTCAATGTCCTATTGTTCGATCTATAGCTCGAGAAATTTTAACTTGCTTGGTGATGCAACCTATTATGAATTTGGCAAGCCCTGGGTATATCAATGAGCTGTTAGAAACCCTTCTACTTTTCATTAAGGAAGAGGGTGCAAACTGGGTGTTTGGGGATCAGTCAACTAATGCAACAAGTCATTCTGTTGCTGCTGGTGGACCTAGTGATCACGCATCCTCAAATAAGAATTTATCTGCAAACCAAGAGGCTGATTTGACATCACCTAAAATGCACTATCAGGGAGGAAAATCCACACAAGATAACACACTGCAGCAAGAGTGTTTGCAGGGCAAGCCAGCAGATTGGGCACGGATGTTGGAGGCTGCAACTCAGAGAAGAACTGAAGTTCTTATGCCTGAGAATCTTGAGAACATGTGGACAAAGGGAAGGaattataagaagaaagagaagaaatataCTAAAGCTAGCATTCAGGATCCTCCGACAAAGATTCCTGTTCCAGATAATTCACTGGCTGATAAAAATTTGAGTAATAAAACATTGTTAAGTAAACCTGGAATGCATGCAGTTCAGGAAGGAAAGTCTACACAGCAGCCAATTCATGAGTTGGGTTCAGATCCCCTGCTAACCACAAATGGGTCACAGTCTTCTATGGACACTTGTAAGGAATTATCTTATGAGGGAGAGTATCAAGTTGATGAAGTGAAGGATGCGAATAGTCTTGCTTCTAATGGATATAAAGGTCTGCTTAAGAGATCCAACAGTACTTCTGCTTTGGCAATTCAACCTGTTATAGATGAGCTTGTAACTTCAGAGATGTACTGCCCCGATTTTGAGAGGCATACAGAAGGATTTCCTGGTTTGAGTGCCTCAGACATGGTTATTAGGAGAGAGGGGCAACTAGTTCCCAAGCTTAAGTGCCGGGTTATGGGAGCATATTTTGAGAAGCTTGGATCCCAATCTTTTGCTGTCTATTCAATTGCAGTGACAGATGAAAACAAAACTTGGTTTGTGAAAAGAAGATACAGGAATTTTGAGCGATTGCATCGACATCTTAAAGATATTCCTAATTACACATTACATTTGCCACCTAAAAGGATATTTTACTCAAGCACAGAAGATGCCTTTGTCCATCAGCGTTGCATTCAGCTTAATAAATATCTCCAGGAGCTCCTTTCAATAGCTAATGTTGCTGAACAACATGAAGTATGGGACTTTTTGAGTGCTTCCTCAAAGAACTACTCTTTTGGGAAATCAGCATCAATGATGAAGACCTTGGCAGTCAATGTAGATGATGCTGTGGATGATATTGTACGCCAGTTTAGGGGGGTTTCAGATGGTTTCATGCGTAAAGTTGTGGGGGCATCATCCCCCACTAATGAGGGTTCATCTACTTCTACCACATGGAATTTGTCCTGTAATGCAGATGAAACAGATAGAAGTACTCCGAGGCAAGTCTCTGCAGAAACAGTTTTTAGCTCTGACAATGAGGACGGTGGAAATTTAATCCATGAGGACATCGATAAAGCAGTAGCAGAAGCTAGTGAGTCGCATTCAGACAATGAATTGAGCTCAAAAGGATACCGATCACAGGTCATAAACCATGCTGAAGAGTCTGTATGCTTAGATCCAGATAGAAAACTTGATTCTATGGTGGAAGCTGGCGTTGGGAAGGATGTTACAGCAACAAATTTCACCCTACTCTCTAATGATTTGGAGGATCCAGTTGGAGTGCCACCTGAATGGGCTCCGCCTAATGTGAGTGTCCCTCTTCTGAATTTGGTTGACAAGATATTTCAGCTTAACAAAAGAGGTTGGCTAAGGAGACAGGCCTTTTGGATATCTAAACAGATACTACAGTTGGTTATGGAAGATGCAATTGATGATTTTCTCTTGAGGCAGATTCATTGGCTCCGGAGAGAGGATACTATTGCGCAAGGGATTTCGTGGCTTCAAGATGTTCTCTGGCCCGGTGGcacattttttctaaaagtagGTGACACTGGAATTGATCAAAGTCATTTTCCAAAAATGAGTGAATATGGTCGAGGCAAGCTTACTAAATCAGCATCAGGGTCTTTTGAACAACAGCTGGAGGCTGCTCGCAGAGCAAGTGAtatcaagaaatttttattcGATGGAGCTCCAACAGCGTTAGTCAGCTTCATTGGGCAAAAGCAGTACAGACGTTGCGCCAGAGATATATACCATTTTAGTCAGTCTACCATATGTGTGAAGCAACTTGCGTACGCGATACTTGAACTCGTACTTGTATCCATCTTCCCTGAGATGCGGAATTTGGTCCAGAATATTCATCGATCTGGGTA 3065 0.4055 MKPVITIYDLIEEAKIRTVWWALFIFSIAYFLTHTSKSMWMNIPMSILFASALRFLVNNVEFHWKVQAPRSETYLSHLEKKQLSPNDSRVSTTLNPAKWNRKIDSPIVENALDDFMDKLLKDFVVDLWYSEITPDREAPELIREIIMDALGEISTRVKEINIVDLFTRDIIDLVGDHFELFRRNQAAIGVDVMLTLSSEERDERIKYHLLNSKELHPALISPESEYKVLQRLMGGVLGTVLRPREAQCPIVRSIAREILTCLVMQPIMNLASPGYINELLETLLLFIKEEGANWVFGDQSTNATSHSVAAGGPSDHASSNKNLSANQEADLTSPKMHYQGGKSTQDNTLQQECLQGKPADWARMLEAATQRRTEVLMPENLENMWTKGRNYKKKEKKYTKASIQDPPTKIPVPDNSLADKNLSNKTLLSKPGMHAVQEGKSTQQPIHELGSDPLLTTNGSQSSMDTCKELSYEGEYQVDEVKDANSLASNGYKGLLKRSNSTSALAIQPVIDELVTSEMYCPDFERHTEGFPGLSASDMVIRREGQLVPKLKCRVMGAYFEKLGSQSFAVYSIAVTDENKTWFVKRRYRNFERLHRHLKDIPNYTLHLPPKRIFYSSTEDAFVHQRCIQLNKYLQELLSIANVAEQHEVWDFLSASSKNYSFGKSASMMKTLAVNVDDAVDDIVRQFRGVSDGFMRKVVGASSPTNEGSSTSTTWNLSCNADETDRSTPRQVSAETVFSSDNEDGGNLIHEDIDKAVAEASESHSDNELSSKGYRSQVINHAEESVCLDPDRKLDSMVEAGVGKDVTATNFTLLSNDLEDPVGVPPEWAPPNVSVPLLNLVDKIFQLNKRGWLRRQAFWISKQILQLVMEDAIDDFLLRQIHWLRREDTIAQGISWLQDVLWPGGTFFLKVGDTGIDQSHFPKMSEYGRGKLTKSASGSFEQQLEAARRASDIKKFLFDGAPTALVSFIGQKQYRRCARDIYHFSQSTICVKQLAYAILELVLVSIFPEMRNLVQNIHRSG 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00257 1021 Gene3D - 551 665 IPR036871 GO:0035091
Bva13g00257 1021 ProSiteProfiles PXA domain profile. 105 284 IPR003114 -
Bva13g00257 1021 MobiDBLite consensus disorder prediction 396 419 - -
Bva13g00257 1021 MobiDBLite consensus disorder prediction 440 463 - -
Bva13g00257 1021 SMART PXA_3 105 290 IPR003114 -
Bva13g00257 1021 CDD PX_SNX19_like_plant 551 655 - -
Bva13g00257 1021 SUPERFAMILY PX domain 551 657 IPR036871 GO:0035091
Bva13g00257 1021 MobiDBLite consensus disorder prediction 702 731 - -
Bva13g00257 1021 PANTHER PX SERINE/THREONINE KINASE PXK 6 1019 - -
Bva13g00257 1021 SMART PX_2 547 656 IPR001683 GO:0035091
Bva13g00257 1021 Pfam PX domain 576 655 IPR001683 GO:0035091
Bva13g00257 1021 Pfam Sorting nexin C terminal 852 988 IPR013937 -
Bva13g00257 1021 ProSiteProfiles PX domain profile. 549 660 IPR001683 GO:0035091
Bva13g00257 1021 MobiDBLite consensus disorder prediction 701 731 - -
Bva13g00257 1021 Pfam PXA domain 105 281 IPR003114 -
Bva13g00257 1021 PANTHER SORTING NEXIN CARBOXY-TERMINAL PROTEIN 6 1019 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00257 Bva-Chr13 1223819 1231935 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00257 K17925 - gmx:100793613 1339.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00257 13 1223819 1231935 Bva13g00257 13 1223819 1231935 ECH