Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00247 ATGGCTTCGCTACTGAAAAAACTGCGACGTGGGGTGCCCTCAGTTCCTGAAAACGAGAATGATAACAGCGTCGAGTGTTCGTTTGCCTTGGAGTATAGTGGCCCTCCTCTTAGTTACTCCATCCCTGAAGTTGCTCCTTTTAAAATTGACCAAATCCCTGTTGCTGTTGTGGCTCATTCTCCTGCATCTCAGTTATATGTTCCAGTTATCCAACCAATTGTAAAATCTAGTcatgcaaaaacaaaactGAAACTTGCTAGAGATTCAGATTCTTTTCATTCTATAAATTCTGAATCTTCCGAAGCTGAATTTGCTCGCTTACGCTCCTCCGGGTCATCGTCAAACCACCATTCTTTGTCCGTTGACTCCTCAAACAGGAAACATAGCTCAGGCCCGTTAGCCTCTGCTGGCGAGTGTGCAGGAAATTTATCGATGAGAATTCCAACTTCGCATGAAATAATTGAAGTCTCTGGAGCGCTGGAATTACCTGATGAAGACAGGGACTTTCAAAATGGGATGAAATCCACCAATTCGGATACAAGGGAATCGAGTTCAAGCTCTCTCTCGGATTCTTCTGAGATTTCCTCTTGCGGAGAAGACGATCGTGAGAATGACAATGACACTCCGAAACATGTGAAACGGCCTTCTGTGACTTTTCGTGATCGCGAGTCAAATGACCTTGCAGTTAACAACGAATTTGATGATTCTCAGTCTGGAAGTATTCTCGTAAGAGAAAGAGCTGAGAGATTTGGGAAAAAAGGTACATGCTATCGATGCCTTAAAGGAAATCGTTTTACAGAGAAGGAGATTTGCATTGTTTGTAGTGCAAAGTATTGCCGTAAATGTGTGTTAAAAGCAATGGGGACCATGCCTCATGGAAGAAAATGTCTTACTTGCATTAATCATAGAATTGATGAGAATAATCGGAGAATCTTGGGTAAATGTTCAAGGATGCTTAAAGGTTTGTTGTCTGAGTCGGAAATTAGACAAATAATGCGTTCCGAAATGTTTTGTAGAGAAAATCAGCTAGCATCTGAGCTTATTCTTGTGAATGGGGAACCTCTTAGCAGAAAACAACTAGTGTCATTGATGAACTGTCCAAGCCCACCAAAAAAGCTAAAACAAGGTTCATATTGGTATGATAGAGCATCTGGATTTTGGGGAAAGGAAGGCCACAAGCCTTGTCAAATTATCAGCCATCTGCTGGAGGTTGGGGGTAAACTAAGGCAAAATGCAAGCAAtggaaacacaaaaatatttataaatgatcGAGAAATTACTAAAGCAGAGTTATGGATGCTGAAGATAGCAGAAGTTCCATGTGAAGGAACGTCTCACTTTTGGGTGAGTGAAGATGGATCGTACCAGGAAGTGGGACAGAAGAATATTAGGGGCCGTCCGCCTCTATGGTCTAAGACTTCAACCAGGATAGTTTGTGCAATGTTGTCTCTGCCAGTTCCTTCAAAATCTATGACTAATAACAGTAATGATCTTAGCGGCAAAGGAGCGAATAGAGTTGCCCCAGGCTGCCTTGAACAGAAAGGGCTTTACAAGCTTCTTCTTGTTGGTTCTACCAAATCTGGAACAAGTACTGTATTTAAACAGGCCAAGATCCTGTATAATGTTCCTTTCTCTGAAAGTGAGCGCCAAAATATGAAGTTGGTGATCCAAAGCAACTTGTATATCTATCTTGGTATACTGCTTGAGGGGCGTGAACAATTTGAGGAAGAGAATTTGTTGAAGCAGAGGAAAAGACAGCTTGTAGATGAATCCACTTCATCTGGGAATGCAGGAAAGACTGAAGTAGCAACAATCTATTCCCTTGGCCCGAGACTGAAAGCTTTCTCAGATTTTCTTATCGAATGTATGGTGTCTGGTAACGTGGACACAATAGTTCTCGCTGCTACTCGTGAATATGCACCATTAGTAGAGGAGCTGTGGAGAGATGCAGCCATTCAAGCGACTTGCAATCGAAGGAATGAACTGGAGATGCTACCTAGAGGTGCTAGTTATTTTCTCGACCGGGCTGTGGAAATTTCAAAGGTAGATTATGAACCCTCTGATATGGACATCCTTTACGCTGAGGGGATAACTCTATCCAATAGTATTACTTCAATGGAATTTTCATTTGGCAAGTCGGATGGCGAGGACTGTTTGGGACCTGAATATCAGCATGATCCTTCTCTCAGATACCAACTCATCAGAGTACATCCAAGAAGCCTCGGAGAAAACTGCAAGCGGTTAGAGATGTTCGAAGACACAAATGTTGTCTTGTTCTGTGTTGCCTTAACTGATTATGGTGAGTATACCGTAGACAGTTGTGGAGTTTCTACTAACAAAATGATGGCAACTAAGAAGCTCTTTGAAAACATCATAACTCATGCTACCTTCAGCAACAAGAATTTCGTTTTAATAATGACCAAATTTGATCTGCTTGAGGAAAAGATTGAACTGGTACCTCTGAAACGATGTGAATGGTTTAGTGACTTCAATCCAGTTATCAGTCACAATCCAAACAGAGGTGTTAACTTTAGCAACAACAACCCACCCTTAGCTCATCGTGCCTTTCAATACATTGCTGTCAAGTTTAAGAAGCTGTTCCTTTCTCTTACTGAGCGGAAGCTATTTGTTTCACTGGTCACTGGACTGGAGCCTGATACGGTTGATGAAGCCCTCAGATATGCGAGGGAGGTTATGCTGTGGAAAAAACCGGGTCCCCCTTCTGTTACTGAGCAGAGTTCAACGATGGATGAGACAAGTATTCTACACAGTTCTACTCTCTA 2783 0.4168 MASLLKKLRRGVPSVPENENDNSVECSFALEYSGPPLSYSIPEVAPFKIDQIPVAVVAHSPASQLYVPVIQPIVKSSHAKTKLKLARDSDSFHSINSESSEAEFARLRSSGSSSNHHSLSVDSSNRKHSSGPLASAGECAGNLSMRIPTSHEIIEVSGALELPDEDRDFQNGMKSTNSDTRESSSSSLSDSSEISSCGEDDRENDNDTPKHVKRPSVTFRDRESNDLAVNNEFDDSQSGSILVRERAERFGKKGTCYRCLKGNRFTEKEICIVCSAKYCRKCVLKAMGTMPHGRKCLTCINHRIDENNRRILGKCSRMLKGLLSESEIRQIMRSEMFCRENQLASELILVNGEPLSRKQLVSLMNCPSPPKKLKQGSYWYDRASGFWGKEGHKPCQIISHLLEVGGKLRQNASNGNTKIFINDREITKAELWMLKIAEVPCEGTSHFWVSEDGSYQEVGQKNIRGRPPLWSKTSTRIVCAMLSLPVPSKSMTNNSNDLSGKGANRVAPGCLEQKGLYKLLLVGSTKSGTSTVFKQAKILYNVPFSESERQNMKLVIQSNLYIYLGILLEGREQFEEENLLKQRKRQLVDESTSSGNAGKTEVATIYSLGPRLKAFSDFLIECMVSGNVDTIVLAATREYAPLVEELWRDAAIQATCNRRNELEMLPRGASYFLDRAVEISKVDYEPSDMDILYAEGITLSNSITSMEFSFGKSDGEDCLGPEYQHDPSLRYQLIRVHPRSLGENCKRLEMFEDTNVVLFCVALTDYGEYTVDSCGVSTNKMMATKKLFENIITHATFSNKNFVLIMTKFDLLEEKIELVPLKRCEWFSDFNPVISHNPNRGVNFSNNNPPLAHRAFQYIAVKFKKLFLSLTERKLFVSLVTGLEPDTVDEALRYAREVMLWKKPGPPSVTEQSSTMDETSILHSSTL 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00247 927 MobiDBLite consensus disorder prediction 907 927 - -
Bva13g00247 927 ProSiteProfiles G-alpha domain profile. 515 922 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva13g00247 927 Gene3D - 518 893 IPR027417 -
Bva13g00247 927 PRINTS Alpha G protein (transducin) signature 754 782 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva13g00247 927 PRINTS Alpha G protein (transducin) signature 518 533 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva13g00247 927 PRINTS Alpha G protein (transducin) signature 684 706 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva13g00247 927 PRINTS Alpha G protein (transducin) signature 802 811 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva13g00247 927 MobiDBLite consensus disorder prediction 195 229 - -
Bva13g00247 927 MobiDBLite consensus disorder prediction 905 927 - -
Bva13g00247 927 MobiDBLite consensus disorder prediction 106 131 - -
Bva13g00247 927 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 2 16 914 - -
Bva13g00247 927 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 16 914 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva13g00247 927 MobiDBLite consensus disorder prediction 159 232 - -
Bva13g00247 927 Gene3D - 550 697 IPR011025 GO:0007165
Bva13g00247 927 CDD G-alpha 517 902 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva13g00247 927 SUPERFAMILY Transducin (alpha subunit), insertion domain 544 694 IPR011025 GO:0007165
Bva13g00247 927 MobiDBLite consensus disorder prediction 106 137 - -
Bva13g00247 927 MobiDBLite consensus disorder prediction 1 21 - -
Bva13g00247 927 Pfam G-protein alpha subunit 514 898 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva13g00247 927 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 513 903 IPR027417 -
Bva13g00247 927 SMART galpha_1 501 900 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva13g00247 927 MobiDBLite consensus disorder prediction 173 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00247 Bva-Chr13 1176583 1181758 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00247 - - gmx:112997598 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00247 13 1176583 1181758 Bva13g00247 13 1176583 1181758 ECH