Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00243 ATGAGAAAGAGCAAGAGTTACTTGGCTATGCGGACAGATTATGAAGATGCAAGCAGTTTGATCGGCTCTGATCTGAAGGAGCTGCGTCTCGCTGCTAAAAAGCTCGCCAAACATGCCGTTCAACTCGGAAGCTTAGGCTTTGGCACCGCTTTCTTCGAATGGCTCGCTTCCTTAGCTGCCATttatttgttgattttggatCGTACAAACTGGAAGACCAACATCCTTACGGCACTACTCATCccatatattttcttgagccttccttctattattttcagCTTCTTAAGGGGAGATGTTGGTAAATGGATTGCTTTCGTTGCTGTTATTTTACGCCTTTTCTTTCCCAAGCGTTTCCCTGATTGGCTGGAATTGCCTGGCGCTTTGATTCTTCTCATTGTTGTGGCTCCTAGTCTATTTGCTGACACCTTGAGAAGCAGCATTGTTGGCGTGGCTATTTGCCTTATTATTGCATGTTATTTGTTCCAAGAACACATTCGGGCATCTGGTGGATTCAGGAATTCCTTCACTCAACCCCATGGCATATCAAACACAATTGGCATACTACTTATCTTAGTCTATCCCATTTGGGCAGTAGTAGTCTACATTGTGTG 614 0.4121 MRKSKSYLAMRTDYEDASSLIGSDLKELRLAAKKLAKHAVQLGSLGFGTAFFEWLASLAAIYLLILDRTNWKTNILTALLIPYIFLSLPSIIFSFLRGDVGKWIAFVAVILRLFFPKRFPDWLELPGALILLIVVAPSLFADTLRSSIVGVAICLIIACYLFQEHIRASGGFRNSFTQPHGISNTIGILLILVYPIWAVVVYIV 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00243 204 Pfam Cold acclimation protein WCOR413 10 191 IPR008892 GO:0016021
Bva13g00243 204 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 4 203 IPR008892 GO:0016021
Bva13g00243 204 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 1-RELATED 4 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00243 Bva-Chr13 1158275 1159767 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00243 - - pop:7456406 305.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00243 13 1158275 1159767 Bva13g00243 13 1158275 1159767 ECH