Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00242 ATGGGACCTATTGTGAGTTTTGGAAATGTTTCAACTACCCAAAAGAATCAAGCTGTGGAACTTGGTGCGTCCTGCTTCTCCTGGGAAGAGTTTCAGCAGTTGGGTAATTTAGATTGGGATCTGCCATCAAAAAAGAGGGCTGAAATCTGCGCGATAATGTACACAAGAGGAACAACTGCTGAAGTGTTATCTATTGACCAACTACTTCTGTTAATAGAGAAAGTGGGAACTGAACAAGACgcattcttctctttctttccccTAGCTCATGTATATGACCATATTACGGAGAGCTATTGCATCTACAAGGGTTCCTCAATAGGATTTTGGCAAGGCGAGGTGAGGTTCTTAATGGAAGATATTCAAGCACTGAAGCCAACCATATTTTGTGGTGTTCCAAGAGTTTTTGACCGTATTTATGCTGGTCTTGCTGAAGGTTGTGGTGGGTTTTTTTCAGCAATAGCCAATGTGTTCTCTATGGTGGGAACAGTTGGGGTCTCCATGACAAACATTGAAGCCAGGCTTGAATCTGTCCCATA 539 0.4082 MGPIVSFGNVSTTQKNQAVELGASCFSWEEFQQLGNLDWDLPSKKRAEICAIMYTRGTTAEVLSIDQLLLLIEKVGTEQDAFFSFFPLAHVYDHITESYCIYKGSSIGFWQGEVRFLMEDIQALKPTIFCGVPRVFDRIYAGLAEGCGGFFSAIANVFSMVGTVGVSMTNIEARLESVP 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00242 179 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 143 - -
Bva13g00242 179 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 142 179 - -
Bva13g00242 179 SUPERFAMILY Acetyl-CoA synthetase-like 21 174 - -
Bva13g00242 179 PANTHER LONG-CHAIN FATTY ACYL COA LIGASE 4 143 - -
Bva13g00242 179 PANTHER LONG-CHAIN FATTY ACYL COA LIGASE 142 179 - -
Bva13g00242 179 Gene3D - 5 171 IPR042099 -
Bva13g00242 179 Pfam AMP-binding enzyme 41 141 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00242 Bva-Chr13 1155301 1156996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00242 142 179 Acyl Lipid Metabolism Gene Families AT1G49430 68.421 6.51e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00242 K01897 - gmx:100790068 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00242 13 1155301 1156996 Bva13g00242 13 1155301 1156996 ECH