Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00239 ATGGATGAAGTACCTGGCTCCGTGGGCACCAGCGCCAGTTTCAGTCTGAGATTGGGCCAAACCATGTTTGCATCTGCTTCCCTCCTCTTCATGTCTCTGGGTGTTGAATTCTACAGTTACACTGCTTTCTgCTATTTGGTAACAATCATGGGTTTGGTTATACCTTGGAGTTTCACATTGGCATTGGTAGATGGATACTCAGTTCTTGTGAAATGCCCCATTCGTCAGCCAGGAATACTGCTGATTATTGTTGTGGGAGATTGGGTATTGTCGACTCTCACTCTAGCAGCAGCTTGCTCAACTGCCAGTGTTGTAAATCTTCTGCTCAACTCCCATGGCTCAATTTGCCCTCCAAAGTTTTGTAACAGGTACCAAATATCTGCAGTCATGGCATTTTTGTCCTGGTTTCTATCCTTCGCGTCATCTCTTTTCAACCTTTGGCTATTACCCTCCTTGTG 458 0.4541 MDEVPGSVGTSASFSLRLGQTMFASASLLFMSLGVEFYSYTAFCYLVTIMGLVIPWSFTLALVDGYSVLVKCPIRQPGILLIIVVGDWVLSTLTLAAACSTASVVNLLLNSHGSICPPKFCNRYQISAVMAFLSWFLSFASSLFNLWLLPSL 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00239 152 Pfam Casparian strip membrane protein domain 9 137 IPR006702 -
Bva13g00239 152 PANTHER CASP-LIKE PROTEIN 5B3 1 151 IPR045009 -
Bva13g00239 152 PANTHER CASP-LIKE PROTEIN 5C3 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00239 Bva-Chr13 1143528 1148446 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00239 - - gmx:100810360 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00239 13 1143528 1148446 Bva13g00239 13 1143528 1148446 ECH