Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00233 ATGCATGAAATAAAGTGGCGCCATTCTAGTTTCAAGCAATTCAAGTTCATGGACGCTTTAGTTTCAACTCACAGGCGCTCCAACAGTGATCCGATGAAAACAAGAGTTAGGGAAGTTGAACTAGACATCTACAAAGGTTCTTATCTGCCCAACATGgaaaaggaaatggCGAAACTAAAAGAAAGCAATGAGTCCAAGAAGAGGCAATTCCATAATATCGATCTTCAAAGTTCTTTGACTCAAGAGATTCTGCAGCTTCAAAAACGATTAAAGCAACAATATGTGGTACGATGTGCATTAGAGAAAGCATGTCATCTGCCATTCTCACAAGATGCTGTTCTGGAAAGTTCAATACCAAAGgCTGCCAAGGAACTGATCGAGGAAATTGGTGTCTTAGAATTAGAAGTTGTGTATCTGGAAAAATATCTGCTCTCTTTGTATCGGCAAAGATTTGATCAACAAATTTCATCTATATCGGACAATGACAGAAGATTGAAATCAGTTTCAGATGTTGATAAAGGAACTTGTGCAGTACCTACGGAGGATAATATTCATATCTCTGAGAAAGAAACTTCAGTTCCACGCTCTGGTATTCTCTTGTCACCCAGAAACTCAGCTGGCAATTCAATCAACGAATGCAATAACCAGTTGGAACAGGAAACTGTTTTAGACTCTAGTGTTCATCGAAGTCACTCCACGCTGTCTCAGAGATCAGTTTGCTCAATTGAAACTTCGCCCATGAAAGCTAAAACAGTAGAATCATACCATTCTCTACCATTGTCCATGCTAGAGGAAGCTCAGAGGGCTAACACCAATTCAAACTGCCTAGCAGAGCATCTTGGGACTTGTTTTTCTGAAAATGTACAAGAGACGCCTAACTGGCTTTCTGAGGAAATGATTAAGTGCATATCAGCAATATACCGTGAACTTGCAGACCCACCCTTTATTAGTCATGATAATACTTCCTCGCCTATTTCATTCTCATCATCAGTTTACGAGGCTTCTTCACAAGTCCAGGGTAATAGGGGGCGCTCACACTGCAAGAAGCTTTCATCCTTCAACAATCCTTTTCACAACAAAGGGGCTAAAGAATTTATTGGACCTTATTGCTCCATGGTAAAGATTCAGCAATTATGCAgagataatgaaaaattaaaggaagtTGAATACATGCTACGAAGGTTTAGGTCCCTTGTTTCTCGATTGCTAGAAGTTGATCCTAGAAAAATGAAGCACGAAGAGAAGCTAGCTTTTTGGATTAATGTGCACAACGCGCTTGTTATGCATGCTTTGTTAATTTATGGAATTCCTTCCAGTAATCTTAAAAGAATGTCCTCAGTACTTAAGGCTGCATATAACATTGGGGGCCACACTATTAGTGTAGGCAAGATACAGAATTTTATTCTGGGATGCAGATTACCTCGTCCAGGACAATGGCTACGGCTCTTGTCCCTTCCGACAAAATCCAAGGTTAGCGATGCAAGAAAAGCATATGCAATAAATAGACCAGAGCCTCTAGTACTATTTGCTCTCTGTTCCGGAAGCCATTCTGATCCTGCGGTGCGTTTGTATACACCCAAGACAGTGTTGGAGGAGCTGGAATCTGCTAAGGAGGAGTACATTTTGTCTACCATGTCTATAACTAAGGAGCAAAAGATACTTCTTCCAAAGATGGTGGATTTCTTTGCAAAGGATTCAGGTCTTGGATCAACTGGCCTGATGGAGATGGTTAAGCCCTATGTACCAGAAtcccaaagaaaaattatacacCAGTTTCAGCAAAAGGGAAAGTCGAAAGGCATTGAATTCATCCCTCATAACTTCAATTTCCAGTGCTTGGTTTCAAAGGAATTAGCTTGGTG 1862 0.3958 MHEIKWRHSSFKQFKFMDALVSTHRRSNSDPMKTRVREVELDIYKGSYLPNMEKEMAKLKESNESKKRQFHNIDLQSSLTQEILQLQKRLKQQYVVRCALEKACHLPFSQDAVLESSIPKAAKELIEEIGVLELEVVYLEKYLLSLYRQRFDQQISSISDNDRRLKSVSDVDKGTCAVPTEDNIHISEKETSVPRSGILLSPRNSAGNSINECNNQLEQETVLDSSVHRSHSTLSQRSVCSIETSPMKAKTVESYHSLPLSMLEEAQRANTNSNCLAEHLGTCFSENVQETPNWLSEEMIKCISAIYRELADPPFISHDNTSSPISFSSSVYEASSQVQGNRGRSHCKKLSSFNNPFHNKGAKEFIGPYCSMVKIQQLCRDNEKLKEVEYMLRRFRSLVSRLLEVDPRKMKHEEKLAFWINVHNALVMHALLIYGIPSSNLKRMSSVLKAAYNIGGHTISVGKIQNFILGCRLPRPGQWLRLLSLPTKSKVSDARKAYAINRPEPLVLFALCSGSHSDPAVRLYTPKTVLEELESAKEEYILSTMSITKEQKILLPKMVDFFAKDSGLGSTGLMEMVKPYVPESQRKIIHQFQQKGKSKGIEFIPHNFNFQCLVSKELAW 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00233 620 Pfam Protein of unknown function, DUF547 407 541 IPR006869 -
Bva13g00233 620 PANTHER TERNARY COMPLEX FACTOR MIP1 LEUCINE-ZIPPER PROTEIN 15 620 - -
Bva13g00233 620 Coils Coil 49 69 - -
Bva13g00233 620 PANTHER UNCHARACTERIZED 15 620 - -
Bva13g00233 620 Pfam Leucine-zipper of ternary complex factor MIP1 75 153 IPR025757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00233 Bva-Chr13 1129053 1132180 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00233 - - gmx:100803450 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00233 13 1129053 1132180 Bva13g00233 13 1129053 1132180 ECH