Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00230 ATGGACTCTGATTTTGATGCCAAGGAGTTCCGAAAGAATTTCTCTAGGAGTAAGAATTATAACCGGAAGGGGTTTGGACACAAAGAGGAGATCCTGGAGCTTATGAATCACGAGTATACCAGTGACATCATCAAGACTTTGAAGGAAAACGGATATGAGCATACATGGGGCAACGTCACAGTGAGGCTAGCTAAAGCCAATGGCTTCTGTTTTGGTGTTGAGAGTGCTGTTCAAATGGCCTATGAATCGAGAAAACAGTTTCCTACTGGGAAGATGTGGCTTACTAATGAAATCATTCACAATCCAACCGTTAATAAGCGGCTAGAGGAGATGAATGTGCAGAATATTCCTCTTGATCAAGGAAAAAAGCAATTTGAGGTTGTCAACGCGGGTGATGTTGTGATTTTGCCTGCTTTTGGAGCTGCAGTGGATGAAATGCTGACTTTAAGTGAGAAAAATGTTCAAATTGTTGATACAACTTGTCCATTGGTTATAAAGgTCTGGAATACTGTTGAGAAGCACAAGAAAGGAGAATTTACCTCAATAATTCATGGTAAATATTCCCATGAGGAAACTGTGGCCACTGCATCTAATGCTGGAAAATATGTCATTGTGAAGAATATGACTGAGAAGTTTAAACTTGCAATTTCTGAGGGCTTTGACCCAGACAGTGACCTGATAAAAGTAGAGAAGCTTCTGGAGAAGACCATGATGCGCAAATATGGTGTGGAAAATATCAACGAACACTTCATAAGATTTAATACAATTTGTAATGCTACTCAGGAGCGACAAGATGCCATGAACAAGCTTGTTGAGCAAGATTTGGATCTTATATTAGTAATCGGTGGCTGGAACTCGAGCAACACTTCACACCTGCAAGAGATAGCTGAGAAAAGCGGAATTCCATCTTACTGGATTGACAGTGAACAAAGAATTGGTCCAGGAAACAGAATAGAATATAAGCTGAAACATGGTGAACaagtagagaaagaaaactttttaCCTGAGGGACCAATAACAATTGGCGTAACATCTGGTGCATCCACTCCAGACAAGGTTGTAGAAGAAGCCCTTGTTAAGGTATTTGACCTGAAGCGTGAAGAATTACTGCAGGCTAAGTA 1121 0.3988 MDSDFDAKEFRKNFSRSKNYNRKGFGHKEEILELMNHEYTSDIIKTLKENGYEHTWGNVTVRLAKANGFCFGVESAVQMAYESRKQFPTGKMWLTNEIIHNPTVNKRLEEMNVQNIPLDQGKKQFEVVNAGDVVILPAFGAAVDEMLTLSEKNVQIVDTTCPLVIKVWNTVEKHKKGEFTSIIHGKYSHEETVATASNAGKYVIVKNMTEKFKLAISEGFDPDSDLIKVEKLLEKTMMRKYGVENINEHFIRFNTICNATQERQDAMNKLVEQDLDLILVIGGWNSSNTSHLQEIAEKSGIPSYWIDSEQRIGPGNRIEYKLKHGEQVEKENFLPEGPITIGVTSGASTPDKVVEEALVKVFDLKREELLQAK 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00230 373 Gene3D - 162 235 - -
Bva13g00230 373 TIGRFAM ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 61 360 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
Bva13g00230 373 PANTHER 4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE, CHLOROPLASTIC 2 371 - -
Bva13g00230 373 Gene3D - 70 160 - -
Bva13g00230 373 Gene3D - 239 373 - -
Bva13g00230 373 CDD lytB_ispH 61 361 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
Bva13g00230 373 Pfam LytB protein 61 359 IPR003451 GO:0019288|GO:0046872|GO:0050992|GO:0051745
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00230 Bva-Chr13 1112574 1115265 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00230 K03527 - qsu:112040117 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00230 13 1112574 1115265 Bva13g00230 13 1112574 1115265 ECH