Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00227 ATGGAGGTTCTTATTGAGGCAAAGGGTCATGCATTGACTCCATTGAGAGTGTTAAGGGGCCTGATATGTTTACTGGTGCTGTTTTCAACAGCATTTGTAATGATAGTGTTCTTTGGCTTTATTAGTGCAGTTATCCTGCGTCTTTTTACCATACATTACAGCAGGAAAGcgacttcttttttctttggtgcTTGGCTAGCTTTGTGGCCTTTTCTATTTGAAAAGATAAACAAGACTAAAGTCGTGTTTTCTGGAGATATTATTCCTTCAAAAGAACGGATCTTGCTAATTGCAAATCACAGAACCGAGGTTGATTGGATGTACTTATGGGACCTTGCCTTGCGGAAGGGATGCCTTggatacataaaatatatacttaagaGCAGCTTGATGAGACTGCCTATATTTGGTTGGGCATTTCACATACTGGAGTTCATCCCAGTGGAAAGGAAATGGGAAGTTGATGAGTCAAACATGCGCAGTATGCTTTCTACATTCACGGATCCCCGAGATCAACTATGGCTTGCTCTTTTCCCTGAAGGCACTGATTTTACTGAGCAGAAGTGCCTTCGAAGTCAAAGATATGCTGCTGATCATGGGTTACCTGTCCtgaaaaatgttttacttCCAAAGACAAAGGGCTTCTGCACCTGCTTGCAAGAATTAAGGGAATCTCTGAGTGCAGTGTATGACGTGACCATTGGCTACAAATATCGTTGCCCATCTTTCTTGGACAATGTCTTTGGGGTGGATCCTTCTGAAGTTCATATTCATGTCCGTCGCTTCACTCTTGATCTTATCCCAGAATCTGAAGATGAAATTGCCACTTGGTTGATGGATAGATTCCAGTGTAAGGACCAGTTGCTTTCCAATTTTCAGTGTCAAGGACAATTCCCTAATCAAGTAACAGAAAGGGACATCTCTGATACGAAGAGTGTTTTGGATTGTGTGATGGTTATCGCGTTGACATGCATATGTATTTTCTACATGTTTACCTCAGTTTGGTTTAAGCTTTATGTAACTCTAGTTTGTGCTTACTTGTGTCCAGCTACATTTTTCCATGTTAGGCCACAGCGAATTCTTGGCTTCTTCGAAACCTTTTCTACTTGTCACCTCTCGAAAACTTG 1127 0.3966 MEVLIEAKGHALTPLRVLRGLICLLVLFSTAFVMIVFFGFISAVILRLFTIHYSRKATSFFFGAWLALWPFLFEKINKTKVVFSGDIIPSKERILLIANHRTEVDWMYLWDLALRKGCLGYIKYILKSSLMRLPIFGWAFHILEFIPVERKWEVDESNMRSMLSTFTDPRDQLWLALFPEGTDFTEQKCLRSQRYAADHGLPVLKNVLLPKTKGFCTCLQELRESLSAVYDVTIGYKYRCPSFLDNVFGVDPSEVHIHVRRFTLDLIPESEDEIATWLMDRFQCKDQLLSNFQCQGQFPNQVTERDISDTKSVLDCVMVIALTCICIFYMFTSVWFKLYVTLVCAYLCPATFFHVRPQRILGFFETFSTCHLSKT 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00227 375 Pfam Acyltransferase C-terminus 248 313 IPR032098 -
Bva13g00227 375 CDD LPLAT_LCLAT1-like 70 260 - -
Bva13g00227 375 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5-RELATED 6 365 - -
Bva13g00227 375 Pfam Acyltransferase 84 237 IPR002123 GO:0016746
Bva13g00227 375 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 26 191 - -
Bva13g00227 375 SMART plsc_2 94 208 IPR002123 GO:0016746
Bva13g00227 375 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 6 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00227 Bva-Chr13 1097599 1100998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00227 8 358 Miscellaneous Gene Families AT1G75020 61.932 2.97e-161 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00227 K13513 - gmx:100814885 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00227 13 1097599 1100998 Bva13g00227 13 1097599 1100998 ECH