Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00224 ATGTCGAAGCTCGTCTTAGTCTTGTCCCTCATTCCACTGCTTCCATTTCTATGCAGCTCTTTCTCTCCTGAAAATCCTTTAGATCGTCGCATACTTGTTTTGCTCGATGACTTCGCCATCAAATCTTCGCACTCGCTGTTCTTCAAGTCTTTGCAGTCTCGGGGTTTTGATCTCGATTTCAAGCTCGCAGACGACCCGAAAATTGCGTTGCAGAGATACGGCCAGTATTTGTACGATGGTTTAATCCTCTTTGCTCCCACGGTCGAACGTTTTGGAGGATCCATTGACTCAGCTGCTATATTGGATTTTGTTGATTCTGGCCACGATTTAATAATTGCAGCTGATAGTAATGCATCTGATGTAATCAGAGAAATTGCTACCGAGTGTGGAGTCGACTTTGATGAGGATCCTGCAGCTAGGGTTATTGATCATGCTGGATATGCAATATCAGCCGTAGAAGGAGACCACACGTTGATTGCTGGTGACAATTTCATTCAGTCAGATGTGATTttgggaaacaaaaaaattgagGCTCCTGTTCTTTTCCAGGGGATTGGACATTCACTAAATCCCTCAAATAGCCTGGTGTTGAAAGTTCTGGCAGCATCTCCTTCAGCCTATTCTGCTAATCCAAAATCTAAGTTGACAAGTCCTCCATCACTTACTGGATCTTCTATCTCATTAGTTTCTATTGTACAgGCAAGAAATAATGCTCGGATATTGATCTCTGGTTCACTGAGCTTGTTCAGCAATAGGTTTTTCAGGTCTAGTGTACAAAAGGCTGGAAGTCCAACCAAACATGACAAGTCAGGTAATGAGCAGTTTTTGACTGAACTGAGTACATGGGTTTTCCATGAAAGAGGTCATCTCAAGGCGGTGAATGTGCAACATCACAAAGTGGGGGAAACAGATGAACCGGCTATTTATAGGATCAATGATGATttggaATACTCTGTTGAGATTTATGAGTGGTCTGGAACAAGTTGGGAACCTTATGTAGCTGACGATGTTCAAGTGCAATTTTACATGATGAGCCCCTATGTCTTGAAGACCTTATCAAACGACAGCAAGgGTCGTTATTTCACATCATTTAAGGTTCCAGATGTCTATGGCGTTTTCCAATTCAAAGTTGAGTACCAAAAACTTGGATACACAAGCTTATCTCTATCAAAGCAGATTCCTGTTCGTCCCTTCAGACACAATGAATATGAGAGATTTATACCAGCAGCTTATCCCTATTATGGAGCCGCATTTTCAATGATGGCGggtttcttcatcttcactgCTGTCCATCTATACAACAAGTA 1307 0.407 MSKLVLVLSLIPLLPFLCSSFSPENPLDRRILVLLDDFAIKSSHSLFFKSLQSRGFDLDFKLADDPKIALQRYGQYLYDGLILFAPTVERFGGSIDSAAILDFVDSGHDLIIAADSNASDVIREIATECGVDFDEDPAARVIDHAGYAISAVEGDHTLIAGDNFIQSDVILGNKKIEAPVLFQGIGHSLNPSNSLVLKVLAASPSAYSANPKSKLTSPPSLTGSSISLVSIVQARNNARILISGSLSLFSNRFFRSSVQKAGSPTKHDKSGNEQFLTELSTWVFHERGHLKAVNVQHHKVGETDEPAIYRINDDLEYSVEIYEWSGTSWEPYVADDVQVQFYMMSPYVLKTLSNDSKGRYFTSFKVPDVYGVFQFKVEYQKLGYTSLSLSKQIPVRPFRHNEYERFIPAAYPYYGAAFSMMAGFFIFTAVHLYNK 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00224 435 Pfam Oligosaccharyltransferase 48 kDa subunit beta 30 435 IPR005013 GO:0005789|GO:0018279
Bva13g00224 435 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT 1 435 - -
Bva13g00224 435 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT 1 435 IPR005013 GO:0005789|GO:0018279
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00224 Bva-Chr13 1084679 1089680 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00224 K12670 - gmx:100803270 763.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00224 13 1084679 1089680 Bva13g00224 13 1084679 1089680 ECH
Bva13g00224 13 1084679 1089680 Bva14g00294 14 1510008 1514424 ECH