Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00222 ATGAAATCAGAATTTAGTAATGGCTGGCCGTCTATTCTGCGTCTTTATCTCAGAGACAAATCCACCACCCGCTTTTGCATATTCCCGAAAGTAAAATCAGCTGACAATAGTCCAGGGAACACACCTGTCTATCTAAATGTGTATGATTTGACACCAGTAAATGGCTACTTTTATTGGGCAGGCCTTGGTATTTTTCACTCTGGGGTTGAAGTTTACGGAGTAGAATATGCCTTTGGAGCTCATGATGATTCAACAAGTGGTGTCTTTGAAGTTGAACCTCGGCAATGCCCCGGCTTTAAGTTTAGGAAGTCCATATTCATTGGAACAACGAGCTTGGATCCTCTCCAGGTTAGAGAGTTCATGGGGCAGCAGTCAGCAAACTATAATGGTGATACTTATCACTTGATTGTGAAGAACTGCAACCATTTCTGTGAAGATATCTGTTACAAGTTGACGGGAAAATCAATGCCAAAATGGATCAATCGTCTTGCAAGAATAGGTTCCTTGTGCAACTGCATTCTCCCTGATGCCCTCAAAGCTTCCACTGTTGGACATGATCCCAACTTTGAAGGGTGTGATGACGAAAAAAAGACTCTGAGGACTGCCTTCAGTTGCTTGTCTTCAATCTCAATGCCCCAGAACTA 644 0.4286 MKSEFSNGWPSILRLYLRDKSTTRFCIFPKVKSADNSPGNTPVYLNVYDLTPVNGYFYWAGLGIFHSGVEVYGVEYAFGAHDDSTSGVFEVEPRQCPGFKFRKSIFIGTTSLDPLQVREFMGQQSANYNGDTYHLIVKNCNHFCEDICYKLTGKSMPKWINRLARIGSLCNCILPDALKASTVGHDPNFEGCDDEKKTLRTAFSCLSSISMPQN 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00222 214 Pfam PPPDE putative peptidase domain 42 177 IPR008580 GO:0008233
Bva13g00222 214 PANTHER DESUMOYLATING ISOPEPTIDASE 5 213 IPR008580 GO:0008233
Bva13g00222 214 SMART DUF862_2a 41 179 IPR008580 GO:0008233
Bva13g00222 214 ProSiteProfiles PPPDE domain profile. 41 178 IPR008580 GO:0008233
Bva13g00222 214 Gene3D PPPDE domains 36 186 IPR042266 -
Bva13g00222 214 PANTHER DESI-LIKE PROTEIN 5 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00222 Bva-Chr13 1078204 1081552 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00222 - K22763 pvu:PHAVU_003G010300g 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00222 13 1078204 1081552 Bva13g00222 13 1078204 1081552 ECH