Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00221 ATGATTGGCCGCAGAGAAGGGCCATTGATGAGAAATAACAACACGCACTCTCTGCGCAAATCGAGAATCGCAATTGCTATAGTAATTGGAATCTTTATTGGATGTGTCTGCGCATTCTTGTTCCCCAATGGGTTCTTCGTTTCTAATTCAATCCCTCATAGCAATTACAATCTCGCAGGATCCAAGACCCAgACAAATTCAGTTGCTTGTGAATCATCAGAACGGGTCAACATGTTGAAGTCAGAGTTTATGGCAGAATCAGAGAAAAATGCTGAGCTGAAAAAACAGGTGAGGAAATTGACCGAGAGGCTTAGGCTAGCAGAGCAGGGGAAAGATCAGGCTCAAAAGCAGTTTCTTGCGTTGGGTAAGCAGCATAAAGCTGGGCCTTTTGGTACTGTCAAGGGATTAAGAACCAACCCTACTGTTATTCCTGATGATTCTGTGAATCCGAGATTGGCAAGGATCTTGGAGAAAGTTGCAGTTGGAAGAGAGCTTATAGTTGCACTTGCCAACTCTAATGTGAAGGATATGCTGGAAGTCTGGTTCACCAACATCAAGAGAGTTGGTATACCCAATTATCTAGTTATTGCTTTGGATGAAGAAATCGCAAAATTTTGTGAATCAAATCAAGTTCCGGTGTATAAGAGAGACCCGGATGAAGGTATTGATTCCATTGGAAGAACTGGAGGAAATCACGTTGTCTCTGGGCTTAAATTTCGTATTCTGAGAGAATTTCTACAGTTGGGATATAGCGTTGTTCTGTCAGATGTTGACATAGTGTACTTGCAGAACCCTTTTGATTATCTGATTAGGGATTCAGATGTGGAGTCGATGAGTGACGGTCATGATAACATGACAGCTTATGGGTATAATGATGTCTTCGATGAACCTGCAATGGGTTGGGCTCGATATGCTCATACTATGAGGATATGGGTTTACAACTCTGGCTTCTTCTATATCAGACCAACAATCCCTGCCATTGAGCTTTTGGATCGTGTGGCCACTCGACTTTCCAATGAACCAAATTCTTGGGACCAGGCTGTTTTCAACGAAGTGCTCTTCTACCCTTCTCATCCTGGTTACGATGGGCTTCATGCTGCCAGAAGAACTATGGATATGTATCTTTTCATGAACAGCAAGGTTCTGTTCAAGACTGTGAGGAATGATCCTAACCTAAGCAAAATAAAACCAGTAATCATTCATGTGAATTACCACCCTGATAAGCTTCCACGAATGAAGGCCATTGTCGAGTACTATGTTAATGGGAAGCAGGATGCTCTCAAACCTTTCCCCAGTGGCTCAGAATG 1307 0.4269 MIGRREGPLMRNNNTHSLRKSRIAIAIVIGIFIGCVCAFLFPNGFFVSNSIPHSNYNLAGSKTQTNSVACESSERVNMLKSEFMAESEKNAELKKQVRKLTERLRLAEQGKDQAQKQFLALGKQHKAGPFGTVKGLRTNPTVIPDDSVNPRLARILEKVAVGRELIVALANSNVKDMLEVWFTNIKRVGIPNYLVIALDEEIAKFCESNQVPVYKRDPDEGIDSIGRTGGNHVVSGLKFRILREFLQLGYSVVLSDVDIVYLQNPFDYLIRDSDVESMSDGHDNMTAYGYNDVFDEPAMGWARYAHTMRIWVYNSGFFYIRPTIPAIELLDRVATRLSNEPNSWDQAVFNEVLFYPSHPGYDGLHAARRTMDMYLFMNSKVLFKTVRNDPNLSKIKPVIIHVNYHPDKLPRMKAIVEYYVNGKQDALKPFPSGSE 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00221 435 Pfam Nucleotide-diphospho-sugar transferase 190 409 IPR005069 -
Bva13g00221 435 Coils Coil 76 117 - -
Bva13g00221 435 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Bva13g00221 435 SUPERFAMILY Nucleotide-diphospho-sugar transferases 166 370 IPR029044 -
Bva13g00221 435 PANTHER GLYCOSYLTRANSFERASE 9 435 - -
Bva13g00221 435 PANTHER ARABINOSYLTRANSFERASE RRA3 9 435 IPR044290 GO:0016757|GO:0080147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00221 Bva-Chr13 1075078 1077571 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00221 K20783 - gmx:100802215 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00221 13 1075078 1077571 Bva13g00221 13 1075078 1077571 ECH