Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00209 ATGGAGGAGAAACGCCGTGAAGCCGGAGCTCAGCCGCCGTCTAGCGCTGATTCGCCGGCATCCGAACCAGCCTCCTCAAGGCGCCGTGCCGGAGgtcaaaagagaaaggcaaATGGTCTCAACGCGTCGAATTCTTCGACTACACCTTCGAAACGCATTACTCGGGAGAAGGCCTCGCCTGTCCACCCTCCGATACACAATGGCCCCTTGACCAGGGCTCGTCAAATTCCCAATAACTTCACCACTGCCGCCACAGCTTCGGCACCAGGCGGCGAGTCTACTCCACCGGTCGCTTCTGTGAAACAGTCCGGGCATGCAGTGCCGCATGAATATTTGAATGGAAACTTGGTGGCTCGGGGAGAGGAATTCAACAAGGAGAGTAAGTGGGAGGCTCTGGAAGCTGCAATTGAAGCTGAATTCGAAGATATCAGATCCCGTGGTAACAATGCTCATGTAGTTCCGAGTCATTGCGGTTGGTTTTCATGGACGGATGTCCATCCAATTGAGAAGCATACATTGCCTTCATTTTTTAACGGGAAAACTGAAAATCGGACTCCTGATACCTATATTGAGATACGTAATTGGATTATGAAGAAGTTTCATGCAAATCCAAATACACTGATTGAATTGAAAGACCTGTCAGAGTTAAATTTTGAAGACTCAGATGCCAAGCAAGAGGTAATGGAGTTTCTGGACCACTggggtttaattaatttccaccCGTTCCCATCTATGGATTCTGCTGTGGCCAGTGCAGATGATGATATTGTGGCAGAAAAAAATTCCTTGGTTGAAAAAGTGTATCGCTTTGAAACTCCACAATTAGGTTCACCTGTTGTTCCAAAGACTACCCTAATGACTCCAGCTATGCCGCCTGGCTTGTTTCCAGAATCTACAATTGCTGAAGAGTTGGTGAAACAGGAGGGTCCATCAGTTGAGTACCATTGCAACTCTTGTTCTGCTGATTGTTCTCGCAAGCGCTATCATTGTCAGAAGCAGGCAGATTTTGATCTATGTACTGATTGCTTTAGTAACGGGAAATTTGGTTCTGGCATGTCTTCAGCGGATTTTATACTTATGGAACCAGCTGAAGTTCCAGGTGTTAGTGGTGGAAAGTGGACTGATCAGGAAACTCTTCTGCTTCTTGAAGCACTAGAACTGTACAAGGAAAATTGGAATGAAATTGCAGAGCATGTTGCAACCAAAACAAAAGCCCAATGTATATTGCACTTTCTTCAGATGCCAATTGAGGATGGCTTTTTTGATTGTGATGATATTGATGCTAGTTTCAAAGAAACTGCTGATCCACCTGCAACAAACAATGGTTCATCTGTCCTAAAAGATGCTTCAGAAATAATTGAGAGCAAAACTAGTGATTTTGGTGAAGGCCAGGTTTTGACTTTGCAAAATGAAACTTCCAAGGCCGAAGATTCTAGTAAGGTGAAAGGTGATAAGGAGACTCCAAAACCTGAAGATGATGGTGAGGAGAAAATCGGTGAGGCTGAGGAAACTCCCAAACCAGAAGATGTCGGTGAAGTCAAAATTAGTGAAGCAGGAAATGATTATGCCACAGTGGCTCTTAAGGAAACATTTGAAGCAATTGGTTTTTCCCATGGACCTGAAGGCCCATCTTCATTTGCTGAAGTGGGTAATCCTGTGATGGCAATGGCAGTTTTCTTTGCACGGTTGGCGGGTTCTGATGCAGCTGTTGCTTCTGCACATTGCTCCTTAAAATCCATTTCTGCAAATTTTCCCAGCATTCAGCTTGCTGCAAGGCATTGCTTTGTTTTGGAAGATCCACCAGATGATAAGAATGAACCAACTAGTGTTGAGAGGGATTCTAATAAAGATGGAGACTTGGatgacaaaaatgaaaaacaggaCAAGTCCATGCTAGATGCTAAAGATTTATCAAATGATAACAATGACAAGAAGAGTGAAACTAATCCTTTAGAAAATAAGAGCCAGCTGGATTCTATTAATGATGGAACCTCAGAAAAACCCATTGCCTTAAAGAAGCAAGCAACAGATAATCATGAGGAAGCTGGGCTTGATAATTGTAATGATTCAAGCAATTCAAAGTTACCCACTGATCAAGCAGCAACCACCATCGGGGATTCAAATGGTTCAATATCCAAGGCTGAAATTTCACCTAGTTCTGCGGGATTATTGGATGGAGCTTCGACTAGTGAACCCTGCCAGCCTGCAAAAGAACTAAAGGATGGAGATTTGGCGTCTGATTCTCTTCCCTCAGAGAAGAATGAACCACAACACTCAATTACACCCAATTCAGCAAATGAGCATCTACAGTCTATACAGACACCAAAAGAGGCAGAATTGGTCTCTAATTCCATTCCCTCGGATGAGAGCAAGCATCAAAATCCACTATCTACGAATCTAATTGGCGAGTCTCTGGAAACAACAAACTCAGTAATGGATGTTGATTTGGTTTCTAACTGCTTGCCATCTGAGAACAATGTATCTCACCCACTTGTTACATCAGATGCATCCCAACCTACAAGGACAGAAAAGGTTGTAGATATGATGTCTTCTTCTGTGTCCTTGGATAAAAATGAACCTTTACATCCAGTCATATCAAATTCTTATGCTGAAAATGGTTCAAGCACagTGGCTGGTGAAGATCACACAGAAGATGgcacaaaagcaaaagatgatATTATCGAAGAGAGGGAGGATAACAAATTTGAGAAAGTAAAACGCGCTGCAGTTTCTACACTTGCTGCAGCAGCAGTAAAGGCTACACTTCTAGCCAATCAGGAAGAAGATCAAATCCGACAACTTGCTACGTTGTTGATAGAAAAGCAGTTGCATAAGTTGGAAGCAAAGTTAGCCTTTTTCAATGAGATGGAGAATGTAACTTTGAGGGTGAGGGAGCAATTGGACCGGTCTCGGCAGAAGCTTTACCATCAGCGTGCAATGATAATTGCATCCCGGCTTGGTTTACCAGCTTCCTCATCTAGAGGAGTACCACCATCGTTTCCAACAAATAGAATTCCTTTGAACCTTGCAAACTCAGGGCCCAGACCACCAATCAACATGAATCCCCAAAGGCCACCTATGTCTAATCCCATGGGCACTTCGGCAACTACCCTTCCTAACCCATTAGCATCTGCAACTGCAGCAGGAAACTTAGTTCGGCCATCCAACTA 3170 0.4281 MEEKRREAGAQPPSSADSPASEPASSRRRAGGQKRKANGLNASNSSTTPSKRITREKASPVHPPIHNGPLTRARQIPNNFTTAATASAPGGESTPPVASVKQSGHAVPHEYLNGNLVARGEEFNKESKWEALEAAIEAEFEDIRSRGNNAHVVPSHCGWFSWTDVHPIEKHTLPSFFNGKTENRTPDTYIEIRNWIMKKFHANPNTLIELKDLSELNFEDSDAKQEVMEFLDHWGLINFHPFPSMDSAVASADDDIVAEKNSLVEKVYRFETPQLGSPVVPKTTLMTPAMPPGLFPESTIAEELVKQEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFSNGKFGSGMSSADFILMEPAEVPGVSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFLQMPIEDGFFDCDDIDASFKETADPPATNNGSSVLKDASEIIESKTSDFGEGQVLTLQNETSKAEDSSKVKGDKETPKPEDDGEEKIGEAEETPKPEDVGEVKISEAGNDYATVALKETFEAIGFSHGPEGPSSFAEVGNPVMAMAVFFARLAGSDAAVASAHCSLKSISANFPSIQLAARHCFVLEDPPDDKNEPTSVERDSNKDGDLDDKNEKQDKSMLDAKDLSNDNNDKKSETNPLENKSQLDSINDGTSEKPIALKKQATDNHEEAGLDNCNDSSNSKLPTDQAATTIGDSNGSISKAEISPSSAGLLDGASTSEPCQPAKELKDGDLASDSLPSEKNEPQHSITPNSANEHLQSIQTPKEAELVSNSIPSDESKHQNPLSTNLIGESLETTNSVMDVDLVSNCLPSENNVSHPLVTSDASQPTRTEKVVDMMSSSVSLDKNEPLHPVISNSYAENGSSTVAGEDHTEDGTKAKDDIIEEREDNKFEKVKRAAVSTLAAAAVKATLLANQEEDQIRQLATLLIEKQLHKLEAKLAFFNEMENVTLRVREQLDRSRQKLYHQRAMIIASRLGLPASSSRGVPPSFPTNRIPLNLANSGPRPPINMNPQRPPMSNPMGTSATTLPNPLASATAAGNLVRPSN 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00209 1056 CDD SANT 389 414 IPR001005 -
Bva13g00209 1056 ProSiteProfiles Zinc finger ZZ-type profile. 311 365 IPR000433 GO:0008270
Bva13g00209 1056 MobiDBLite consensus disorder prediction 881 895 - -
Bva13g00209 1056 MobiDBLite consensus disorder prediction 685 727 - -
Bva13g00209 1056 SUPERFAMILY Homeodomain-like 149 245 IPR009057 -
Bva13g00209 1056 SUPERFAMILY RING/U-box 312 373 - -
Bva13g00209 1056 CDD ZZ_RSC8 314 358 IPR041984 -
Bva13g00209 1056 Pfam SWIRM-associated region 1 912 988 IPR032451 -
Bva13g00209 1056 Pfam SWIRM domain 154 239 IPR007526 GO:0005515
Bva13g00209 1056 MobiDBLite consensus disorder prediction 1 77 - -
Bva13g00209 1056 SMART zz_5 310 354 IPR000433 GO:0008270
Bva13g00209 1056 MobiDBLite consensus disorder prediction 868 895 - -
Bva13g00209 1056 ProSiteProfiles Myb-like domain profile. 365 415 IPR001005 -
Bva13g00209 1056 Gene3D - 304 356 IPR043145 -
Bva13g00209 1056 MobiDBLite consensus disorder prediction 598 651 - -
Bva13g00209 1056 MobiDBLite consensus disorder prediction 475 513 - -
Bva13g00209 1056 MobiDBLite consensus disorder prediction 469 513 - -
Bva13g00209 1056 ProSiteProfiles SWIRM domain profile. 151 248 IPR007526 GO:0005515
Bva13g00209 1056 PANTHER SWI/SNF COMPLEX-RELATED 44 1025 - -
Bva13g00209 1056 SMART sant 369 417 IPR001005 -
Bva13g00209 1056 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 366 407 IPR017930 -
Bva13g00209 1056 MobiDBLite consensus disorder prediction 1025 1056 - -
Bva13g00209 1056 Pfam Myb-like DNA-binding domain 371 413 IPR001005 -
Bva13g00209 1056 Pfam Zinc finger, ZZ type 313 349 IPR000433 GO:0008270
Bva13g00209 1056 MobiDBLite consensus disorder prediction 37 54 - -
Bva13g00209 1056 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3D 44 1025 - -
Bva13g00209 1056 Gene3D - 368 419 - -
Bva13g00209 1056 MobiDBLite consensus disorder prediction 1009 1056 - -
Bva13g00209 1056 SUPERFAMILY Homeodomain-like 367 419 IPR009057 -
Bva13g00209 1056 ProSitePatterns Zinc finger ZZ-type signature. 316 342 IPR000433 GO:0008270
Bva13g00209 1056 ProSiteProfiles SANT domain profile. 368 419 IPR017884 -
Bva13g00209 1056 Gene3D - 157 242 IPR036388 -
Bva13g00209 1056 MobiDBLite consensus disorder prediction 750 796 - -
Bva13g00209 1056 MobiDBLite consensus disorder prediction 598 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00209 Bva-Chr13 1007909 1014819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00209 314 447 EF-hand Containing Proteins AT3G07740 30.769 2.07e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00209 K11649 - gmx:100799723 1203.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00209 13 1007909 1014819 Bva13g00209 13 1007909 1014819 ECH