Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00203 ATGGCTACACTTTCTCTCCTCCTCTGTCTTTTCCTCATTGTCATCGCCTTTTCTTTGGCTGAGTCACAATCCTACGTAGGAGTAAATTATGGCCAAGTCGCTGACAACCTTCCTGCGCCGGCAGCCACGGTGAAACTCCTCCAATCCACCACCATTGCAAAAGTCCGGATATACGGAGCCGATCCGGATATTATCAAGGCTCTGGCTAACACCGGCATCGGAATCGTCATCGGCACTGCTAATGACGAAATTCCAAAACTGGCCTCCGATCCCAACTACGCGACTCAGTGGATCAATGCGAACGTGGTACCCTACTATCCATCCAGCAACATCACCTTAATCATTGTTGGTAACGAGATCATGACCTCCGGCAATCAGGGCCTCATAGCTCAACTCATGCCGGCAATGGGAAATATCCAAACTGCCCTTAGCTCGGCCTCACTTAACGGCAAGATCAAAGTCTCCACCGTACATTCCATGGCCGTGTTGACTCAGTCAGATCCACCTTCATCCGGATTGTTCAACGAGGGATTCCAGGACACGATGAAACAGTTGCTTTCGTTCTTGAAAGATAACAAATCGCCATTTACCATCAACCCATATCCGTTCTTCGCATACAAGAACGATCCAACACCGGAAACACTTGCATTCTGTGTGTTTCAACCCAACTCGGGACGAGTTGACTCGGGTAACGGGAAGCTCTACACGAACATGTTCGATGCTCAgGTTGATGCAGTGCATTCTGCTTTGAGTAGGATGGGGTTCCAAGACGTTGAGATCGTTGTGGCTGAGACAGGTTGGCCCTCTCGTGGGGACGACAACGAAGTGGGACCCAGTGTTGAGAATGCCAAGGCCTATAACGGCAACCTCGTTGGACATCTCAAATCATTGGTGGGAACCCCGTTGATGCCTGGCAAGTCCGTGGACACATACATTTTTGCGCTCTATGACGAGGATCTCAAACAGGGTCAAGGATCTGAACGTGCTTTTGGCCTCTACAACACTAATCTCACCATGGTATACGATGTTGGCCTTGCCAAGAATCAGGTTCCAACTACTCCAGTGGCTCCTCCACCTAAGACGGCAACGGATTGGTGTGTTCCAAAATCTGGTGTTTCTGAAGATCAATTGCAGGCAAATCTAGACTACGCCTGCAGCCACGGAATAGATTGTGGGCCAATTCAACCAGGAGGTGCTTGTTTTGAACCAAACACTGTAGCATCACATGCTGCTTATGCCATGAATCTTTACTACCAAACAGTTGGTAGAAATCCATGGAACTGTAATTTCTCGCAAACGGCAACACTCACATCCACAAATCCTAGTTACAATGGCTGCGTTTACCCAGGTGGGAGCTG 1358 0.4897 MATLSLLLCLFLIVIAFSLAESQSYVGVNYGQVADNLPAPAATVKLLQSTTIAKVRIYGADPDIIKALANTGIGIVIGTANDEIPKLASDPNYATQWINANVVPYYPSSNITLIIVGNEIMTSGNQGLIAQLMPAMGNIQTALSSASLNGKIKVSTVHSMAVLTQSDPPSSGLFNEGFQDTMKQLLSFLKDNKSPFTINPYPFFAYKNDPTPETLAFCVFQPNSGRVDSGNGKLYTNMFDAQVDAVHSALSRMGFQDVEIVVAETGWPSRGDDNEVGPSVENAKAYNGNLVGHLKSLVGTPLMPGKSVDTYIFALYDEDLKQGQGSERAFGLYNTNLTMVYDVGLAKNQVPTTPVAPPPKTATDWCVPKSGVSEDQLQANLDYACSHGIDCGPIQPGGACFEPNTVASHAAYAMNLYYQTVGRNPWNCNFSQTATLTSTNPSYNGCVYPGGS 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00203 452 Gene3D - 361 447 - -
Bva13g00203 452 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 7 5 445 - -
Bva13g00203 452 Gene3D Glycosidases 24 352 - -
Bva13g00203 452 Pfam X8 domain 365 435 IPR012946 -
Bva13g00203 452 SMART X8_cls 364 448 IPR012946 -
Bva13g00203 452 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 5 445 IPR044965 GO:0004553|GO:0005975
Bva13g00203 452 SUPERFAMILY (Trans)glycosidases 26 344 IPR017853 -
Bva13g00203 452 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
Bva13g00203 452 Pfam Glycosyl hydrolases family 17 26 343 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00203 Bva-Chr13 982550 986206 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00203 20 449 Miscellaneous Gene Families AT2G16230 62.731 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00203 - - gmx:100810568 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00203 13 982550 986206 Bva13g00203 13 982550 986206 ECH