Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00202 ATGGAAGAGAAACTGATCGAGAGATTGGAATCGGCGGTCGCGCGGTTAGAGGCGCTATCGGCCGGAGTTCAGTCCCGTGGTTTACCCGGAGGTGTTGGAGATGCGGCACCCTCCGGCGTCGATGTGGCGGCGGATCCGTCAATTGTTGCCTTTAGCGATCTGATGGAACAGTATGTCGTTAGGTTTTCGAGTGCTGCGGAGAAGATTGGAGGACAGGTCTTGGACGTCAGTAACATTGTGAAAGAAGCTTTTGTTGTGCAGAAAGAGCTTTTGATCAAGGTCAAGCAAACTCAGAAGCCTGACCATGCTGGTTTAGCTGAATTTCTGAAACCATTAAATGAAGTTATCATGAAAGCCACAGCAATGACCGAAGGAAGGAGATCTGATTTTTTTAACCACTTGAAGGCCGCTGCTGACAGTCTCTCAGCTCTAGCCTGGATTGCATTTACAGGAAAGGATTGTGGTATGAGTATGCCAATAGCACATGTGGAAGAAAGTTGGCAAATGGCTGAGTTTTACTGCAACAAGGTGCTTGTAGAATATAGAAACAAAGACCCAAATCATGTTGAGTGGGCCAAAGCTCTTAGAGAATTATATATGCCTGGTTTGAGGGATTATATCAAGAGTTTTTATCCTTTAGGCCCTGTCTGGAGTCCAACAGGGAAAGCTATTGCTCCTTCAAAAGCTCCTGCGCCTGGTGCGCCTGCTCCCCCACCTCCACCATCTGCTTCTCTCTTTAGTTCTGACTCATCTCAGGCTTCTTCCTCTAAGCCCTTAAAGGGAATGCCTGCTgtttttcaagaaataaattcaCGGAGTGTAACTGGAGGTTTGAGAAAGGTTACAGCTGATATGAAGACAAAGAATCGTGCAGATAAAACTGGAATTGTTAATGCtagtgaaaaagaaagtcGTGCAGCTTCACCTTCTTTCTCTAAAGCAGGACCACCGAAGTTAGAACTTCAATTGGGTCGCAAATGGGCTGTTGAGAATCAAATTGGGAAGAAAAACTTGGTCATTGATGACTGTGATTCAAAGCAATCTGTATACATTTATGGTTGCAAGGATTCTGTTTTGCAGATCCAAGGCAAAGTCAACAATATAACTATTGACAAGTGCACAAAGATGGGAGTTGTGTTTAAGGATGTTGTTGCAGCTTTTGAGATTGTGAACTGTAATGGGGTTGAGGTGCAGTGTCAGGGTTCAGCTCCAACAATATCAGTAGACAATACTTCTGGTTGCCAGCTTTATCTGAGCAGAGATTCTTTAGAGGCATCCATATCTACAGCCAAGTCAAGTGAAATCAATGTATTGGTGCCTGGCGCTGGGCCAGATGATGATTGGGCGGAGCATTCTTTACCACAACAATACATTCATGTGTACAAGGATGGTCGTTTCGAAACTACTCCAGCTTCCCATTCTGGAGGGTA 1430 0.4413 MEEKLIERLESAVARLEALSAGVQSRGLPGGVGDAAPSGVDVAADPSIVAFSDLMEQYVVRFSSAAEKIGGQVLDVSNIVKEAFVVQKELLIKVKQTQKPDHAGLAEFLKPLNEVIMKATAMTEGRRSDFFNHLKAAADSLSALAWIAFTGKDCGMSMPIAHVEESWQMAEFYCNKVLVEYRNKDPNHVEWAKALRELYMPGLRDYIKSFYPLGPVWSPTGKAIAPSKAPAPGAPAPPPPPSASLFSSDSSQASSSKPLKGMPAVFQEINSRSVTGGLRKVTADMKTKNRADKTGIVNASEKESRAASPSFSKAGPPKLELQLGRKWAVENQIGKKNLVIDDCDSKQSVYIYGCKDSVLQIQGKVNNITIDKCTKMGVVFKDVVAAFEIVNCNGVEVQCQGSAPTISVDNTSGCQLYLSRDSLEASISTAKSSEINVLVPGAGPDDDWAEHSLPQQYIHVYKDGRFETTPASHSGG 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00202 476 ProSitePatterns CAP protein signature 1. 5 17 IPR018106 -
Bva13g00202 476 Pfam Adenylate cyclase associated (CAP) C terminal 316 473 IPR013912 GO:0003779|GO:0007010
Bva13g00202 476 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 47 241 IPR036222 -
Bva13g00202 476 Pfam Adenylate cyclase associated (CAP) N terminal 3 64 IPR013992 GO:0003779|GO:0007010
Bva13g00202 476 MobiDBLite consensus disorder prediction 230 244 - -
Bva13g00202 476 Gene3D - 47 223 IPR036222 -
Bva13g00202 476 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 1 475 - -
Bva13g00202 476 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 316 475 IPR036223 -
Bva13g00202 476 MobiDBLite consensus disorder prediction 284 299 - -
Bva13g00202 476 Gene3D - 315 475 IPR016098 -
Bva13g00202 476 ProSiteProfiles C-CAP/cofactor C-like domain profile. 316 453 IPR017901 -
Bva13g00202 476 Coils Coil 6 26 - -
Bva13g00202 476 SMART carp 354 391 IPR006599 -
Bva13g00202 476 SMART carp 392 429 IPR006599 -
Bva13g00202 476 MobiDBLite consensus disorder prediction 224 262 - -
Bva13g00202 476 MobiDBLite consensus disorder prediction 284 315 - -
Bva13g00202 476 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 1 475 IPR001837 GO:0003779|GO:0007010
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00202 Bva-Chr13 976621 980508 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00202 K17261 - cit:102607481 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00202 13 976621 980508 Bva13g00202 13 976621 980508 ECH