Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00196 atgAATTTTGCAGCATCATTATGTAGAAGATTGAATATCAAGGAGCTTGTGACAAATGTTCCTGTTTACCAGAGTGCTAGTGatGTTTCTGGAGAAGGATTGAGTTTGGTGTTCAGGCGATGGGCTACCAAAAAGTCTGCAGGATCTACAAAGAATGGACGAGACTCAAAACCCAAGAATCTTGGCGTGAAGAAATTTGGCGGAGAGAGAGTGATACCTGGGAATATCATTGTTAGGCAACGAGGCACTCGTTTTCATCCCGGAAACTATGTTGGAATGGGGAAAGATCATACCCTTTTTGCTTTGAAAGAGGGATGTGTCAAGTTTGAACGTAACAAACTCACTGGACGTAAGTGGGTGCATGTTGACCCCAAGGATGGTCATGTTCTCCACCCTGTGTATGCAAATGTTGCTGCATCCGAGCAGAAGGTTGCTGCCTA 440 0.4409 MNFAASLCRRLNIKELVTNVPVYQSASDVSGEGLSLVFRRWATKKSAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGNYVGMGKDHTLFALKEGCVKFERNKLTGRKWVHVDPKDGHVLHPVYANVAASEQKVAA 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00196 146 SUPERFAMILY Ribosomal L27 protein-like 42 121 - -
Bva13g00196 146 PRINTS Ribosomal protein L27 signature 94 118 IPR001684 GO:0003735|GO:0005840|GO:0006412
Bva13g00196 146 PRINTS Ribosomal protein L27 signature 44 68 IPR001684 GO:0003735|GO:0005840|GO:0006412
Bva13g00196 146 PRINTS Ribosomal protein L27 signature 69 93 IPR001684 GO:0003735|GO:0005840|GO:0006412
Bva13g00196 146 Pfam Ribosomal L27 protein 42 122 IPR001684 GO:0003735|GO:0005840|GO:0006412
Bva13g00196 146 ProSitePatterns Ribosomal protein L27 signature. 74 88 IPR018261 GO:0003735|GO:0005840|GO:0006412
Bva13g00196 146 PANTHER 50S RIBOSOMAL PROTEIN L27-LIKE 1 145 - -
Bva13g00196 146 PANTHER RIBOSOMAL PROTEIN L27 1 145 IPR001684 GO:0003735|GO:0005840|GO:0006412
Bva13g00196 146 Gene3D - 46 146 - -
Bva13g00196 146 Hamap 50S ribosomal protein L27 [rpmA]. 41 125 IPR001684 GO:0003735|GO:0005840|GO:0006412
Bva13g00196 146 TIGRFAM L27: ribosomal protein bL27 42 122 IPR001684 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00196 Bva-Chr13 948602 950978 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00196 K02899 - qsu:112038617 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00196 13 948602 950978 Bva13g00196 13 948602 950978 ECH