Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00192 ATGGGTTCTAACCCGAGAACCACCTCCAATGGCGACGGAGACGTTCTGATCCACCAGAACCGAAGGTTACCGGATTTCTTACAGAGTGTTAATCTGAAGTATGTGAAACTTGGGTACCATTATTTGATGACCCACCTTTTGACTCTCTGTTTGATCCCTCTCATGTCGGTCATCATCATCCAAGCTTATCAGATGAACCCTGATGATGTTCACCAGCTCTGGGTTCACCTCCAATACAATCTCGTTAGTGTTATTATCTGCTCTGCTGTTCTGGTTTTTGGATCCACCGTTTACATAATGACTCGCCCGAGATCGGTTTACCTGGTGGACTATTCCTGCTATCGACCCCCTTACGGTCTCCAAGTCAAATTCCGTCAATTCATGGAGCACTCGAAGCTCACCGGGGACTTCGATGAGTCATCTCTTGAGTTTCAGCGTAAAATTCTCGAGCGCTCTGGGCTTGGAGAAGAAACATATGTCCCTGAAGCTATGCATTTCATCCCACCTAGACCTTCTATGGCAGCTGCAAGAGAAGAAGCCGAGCAGGTGATGTTTGGTGCTTTGGATAATCTGTTTGCAAATACCAACATTAAACCCAAAGACATTGGAATCCTTGTTGTGAATTGTAGCTTGTTCAATCCAACACCTTCACTTTCTGCTATGATCGTGAACAAGTACAAGCTGAGGGGTAATATCAGAAGCTTCAACCTAGGGGGTATGGGATGCAGTGCTGGTGATATTGCAATTGATCTCGCTAAGGATATGCTTCAAGTTCATAGGAACACTTATGCAGTAGTGGTTAGCACGGAGAACATTACTCAAAATTGGTACTTTGGGAACAAGAAGTCCATGTTGATACCCAATTGCTTGTTTCGCGTTGGTGGGTCTGCGATTTTGCTTTCCAACAAAGCCTCCGTTAGGAGAATAGCCAAGTACAAGCTCGTTCATGTTGTAAGGACTCATAAAGGTGCTGACGATAAGGCATTCAGGTGTGTTTATCAGGAGCAGGATGAGGCAGGGAAAATAGGGGTTTCATTATCAAAGGAGCTCATGGCTATTGCCGGTGGGGCTCTTAAGACTAACATTACCACATTGGGTCCCCTTGTACTGCCCTTAAGAGAGCAGCTTCTGTTTTTTGCTACTTTGGTTGTAAAGAAGCTTTTCAATGCCAAAGTGAAGCCTTATATCCCTGATTTCAAGCTTGCTTTTGAGCACTTCTGCATTCACGCTGGTGGTAGGGCTGTGATTGATGAGCTCGAGAAGAATCTGCAGCTTCTGCCACTGCACGTTGAGGCATCTAGAATGACTCTGCACCGTTTTGGGAACACTTCGTCAAGCTCAATTTGGTATGAATTGGCTTACACAGAGGCAAAGGGAAGGATGAGAAAGGGGAACAGAGTGTGGCAGATTGCTTTCGGAAGTGGCTTTAAGTGTAACAGCGCAGTGTGGCAAGCACTTAGAAATGTGAAGCCCTCGCCTAAGAGTCCATGGGAAGATTGCATTGATAGGTACCCAGTTGAGATTGTTCTATA 1532 0.455 MGSNPRTTSNGDGDVLIHQNRRLPDFLQSVNLKYVKLGYHYLMTHLLTLCLIPLMSVIIIQAYQMNPDDVHQLWVHLQYNLVSVIICSAVLVFGSTVYIMTRPRSVYLVDYSCYRPPYGLQVKFRQFMEHSKLTGDFDESSLEFQRKILERSGLGEETYVPEAMHFIPPRPSMAAAREEAEQVMFGALDNLFANTNIKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGDIAIDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAILLSNKASVRRIAKYKLVHVVRTHKGADDKAFRCVYQEQDEAGKIGVSLSKELMAIAGGALKTNITTLGPLVLPLREQLLFFATLVVKKLFNAKVKPYIPDFKLAFEHFCIHAGGRAVIDELEKNLQLLPLHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRKGNRVWQIAFGSGFKCNSAVWQALRNVKPSPKSPWEDCIDRYPVEIVL 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00192 510 SUPERFAMILY Thiolase-like 315 484 IPR016039 GO:0016746
Bva13g00192 510 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 404 484 IPR013747 -
Bva13g00192 510 PANTHER 3-KETOACYL-COA SYNTHASE 14 509 IPR012392 GO:0006633|GO:0016020|GO:0016747
Bva13g00192 510 PANTHER 3-KETOACYL-COA SYNTHASE 4 14 509 - -
Bva13g00192 510 PIRSF Very_long_ch_3-ktacl-CoA_syn 25 510 IPR012392 GO:0006633|GO:0016020|GO:0016747
Bva13g00192 510 CDD CHS_like 88 483 - -
Bva13g00192 510 Gene3D - 121 485 IPR016039 GO:0016746
Bva13g00192 510 SUPERFAMILY Thiolase-like 92 309 IPR016039 GO:0016746
Bva13g00192 510 Pfam FAE1/Type III polyketide synthase-like protein 98 387 IPR013601 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00192 Bva-Chr13 928493 930566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00192 17 508 Miscellaneous Gene Families AT1G19440 84.553 0.0 891
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00192 K15397 - zju:107403629 925.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00192 13 928493 930566 Bva13g00192 13 928493 930566 ECH