Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00156 ATGGAGGAGCAGAGGAATGCTGAAGCAGAAGAgcaagagaaggagaagaacaaaaacaataagaaGAGGAATGCAGATCCAGAGTTGTTCAGCTACTTGCTGCAGCCTGTGAGCGCTGAACGTGATCCCGAATACATCGGCGTTCGACGCCTCCTTCTTTACCGGAAGGCCGAGGCCGGTGTTTTCCGCCGTAGAGAATGGAGATGCAATGGAAAAGGTTATGTGGCCTATCGTAATTACATATGCAGGCAAAGGAACTGCGAAAGCTCACGTGTCTCAAGCCTCCAAGGCACTCCCGGAAACAGTGGGCGATGGTTTCCACCTCCAACTCCAACTCCACTATCCCGTTGTTTGTCTGAGGTGGACAGCTGGAGTTCTGGGCGGgaTCTGCAAAGTGTCAATCCACTCTCTAATCATAGAGCAAGTTTTGCCTCAAGTGTGAGTGACAGTGATTATCTGCGACATCGAGGGGTTGAGCCCGCCTATTCTTTTGTGGGGATGCATTGCATCTTTGATCAATGCAAAACCTCCGTTACAATATTGAAGTTTGGACACATGAGTTCTGATCTTCTAGCATATGGGGCATCAGACGGAACCTTGATAGTATGCACTGTCTCTGAGAAACCTTCAGTTATCAAACAATTGGTTGGGCATTCCAAAGATGTCACAGattttgatttttcatcaaataatcAGTATAttgcttcatcttcattggATAAAACTGTGAGAGTATGGGAGATAGAGAAAGGCATCTGTATACGGGTGATATATGGAGTTTCTTCACAATTGTGTATTCGTTTTCACCCTGTAAATAACAACTTCCTTTCAGTTGGCAAtgcaaacaaagaaatcaatGTGTTCAATTTCAGCACTGGAAgggtaattaataaaacagtATTTGACAGTGAAGTTACATCTATGGATAATGATCACACGGGAAACCTCATTTTTTGTGGTGATGGACAGGGATGCATATACTCGGTAAATATGAATTCTCGCACTGGAATGTTATCACGTAGTCATCGTCATCGAAGTGGCAGTAAGAACAAATCTCCTGTTTCAACAGTACAGTATCGAAGCTTCTCTCTACTGGCTGGTGGTCCTGTGTTGCTGGCATGTACTCAGGATGGAAATCTGTCTTTCTTCAgTGTTGCTTTGGAGGTGCAAGGCTATTTGACTCTTCGCTGCGCGCTAAAATTAGCACCACGTATGCACAACATTCAAGCTTCTTTTTGTCCTCTTATTTCCCTTGAAAAAGGAGAATTCATAGTTACTGGAAGTGAGGATTCAAATGTCTATTTCTATGATTTAACAAAGCCAAGACATACATGCGTAAACAAGCTCCAGGGTCATCGTTCTCCAGTCATTGGTATTGCTTGGAATTATGGAGAAAACTTGTTGGCTTCATCTGATTCATATGGCACGGTAATTGTATGGAAGAGAGCGAGaacaaatcaaaacaagaatttata 1475 0.4027 MEEQRNAEAEEQEKEKNKNNKKRNADPELFSYLLQPVSAERDPEYIGVRRLLLYRKAEAGVFRRREWRCNGKGYVAYRNYICRQRNCESSRVSSLQGTPGNSGRWFPPPTPTPLSRCLSEVDSWSSGRDLQSVNPLSNHRASFASSVSDSDYLRHRGVEPAYSFVGMHCIFDQCKTSVTILKFGHMSSDLLAYGASDGTLIVCTVSEKPSVIKQLVGHSKDVTDFDFSSNNQYIASSSLDKTVRVWEIEKGICIRVIYGVSSQLCIRFHPVNNNFLSVGNANKEINVFNFSTGRVINKTVFDSEVTSMDNDHTGNLIFCGDGQGCIYSVNMNSRTGMLSRSHRHRSGSKNKSPVSTVQYRSFSLLAGGPVLLACTQDGNLSFFSVALEVQGYLTLRCALKLAPRMHNIQASFCPLISLEKGEFIVTGSEDSNVYFYDLTKPRHTCVNKLQGHRSPVIGIAWNYGENLLASSDSYGTVIVWKRARTNQNKNL 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00156 491 PANTHER WD REPEAT-CONTAINING PROTEIN 13 9 485 - -
Bva13g00156 491 Coils Coil 1 26 - -
Bva13g00156 491 Gene3D - 129 261 IPR015943 GO:0005515
Bva13g00156 491 SUPERFAMILY WD40 repeat-like 176 483 IPR036322 GO:0005515
Bva13g00156 491 ProSiteProfiles Trp-Asp (WD) repeats profile. 215 256 IPR001680 GO:0005515
Bva13g00156 491 MobiDBLite consensus disorder prediction 1 24 - -
Bva13g00156 491 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 449 481 - -
Bva13g00156 491 ProSitePatterns Trp-Asp (WD) repeats signature. 234 248 IPR019775 -
Bva13g00156 491 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 215 251 - -
Bva13g00156 491 SMART WD40_4 292 330 IPR001680 GO:0005515
Bva13g00156 491 SMART WD40_4 401 437 IPR001680 GO:0005515
Bva13g00156 491 SMART WD40_4 442 481 IPR001680 GO:0005515
Bva13g00156 491 SMART WD40_4 208 247 IPR001680 GO:0005515
Bva13g00156 491 SMART WD40_4 250 289 IPR001680 GO:0005515
Bva13g00156 491 SMART WD40_4 163 204 IPR001680 GO:0005515
Bva13g00156 491 PANTHER WD REPEAT PROTEIN 26-RELATED 9 485 - -
Bva13g00156 491 ProSiteProfiles Trp-Asp (WD) repeats profile. 449 481 IPR001680 GO:0005515
Bva13g00156 491 Gene3D - 404 491 IPR015943 GO:0005515
Bva13g00156 491 Gene3D - 262 397 IPR015943 GO:0005515
Bva13g00156 491 Pfam WD domain, G-beta repeat 212 246 IPR001680 GO:0005515
Bva13g00156 491 Pfam WD domain, G-beta repeat 445 481 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00156 Bva-Chr13 762835 768403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00156 187 309 Miscellaneous Gene Families AT5G08390 25.600 7.53e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00156 K24739 - gmx:100792346 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00156 13 762835 768403 Bva13g00156 13 762835 768403 ECH