Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00072 ATGGACGCTTTGCGAAGACAAGCCAGCAAATTCAGAGACCAAGTAACTAAACAACAACAGgCTGTAATAAAACAGTTAAGCAGTAGTAAATATGAGAGCTCAGATGTAATGGTCATTGACGAGGTTGAAATGCAGACACATCAACAGCTAGAGAAACTTTACAGGTCCACCCGTGCCGGGAAGGATTTCCAAAAGGAAGTTGTTAAAGCAGCAGAAACATTTACAGCAATAGGTTATAAGCACGTTGAAGCAGAATATCCATGGTGGACAGGAATGAAGCTTTCTGAGGATTGCTGTAAATATGGGGCAGAGAACATTAGTGACAACATTTTGGCTAAGGCTGCGTCAGTATATGGTGATGCTCGCAAACATGTGGAAAAAGAGCAAGAAGAATTAAATCAGCTTTTACATATTCAGGTTTTAGACCCCTTGAGAGCAATGATCAATGGTGCACCTTTGGAGGATGCTCGTCATCTTGCTCAAAGATATAGTCGGATGAGACAAGAAGCAGAGGCAATGAAGGAGGAGATTTCCAGAAGACAAGCACGGGTTAGGGAATCTCCAACTCCTGAACATGTTGCAAAGCTGCATGCTACTGAAGCAAAGGTTCAGGAGTTAAAAGCAAACATGGCAGTTCTTGGTAAAGAATCTACAGCTGCGTTGGCTGTTGTTGAAGCGCAACAGCAAAGACTGACATTTCAGAGACTTGTTGCTATGgttgaaggagaaaagactTTCCATTTAAGAGTTGCAGCTATTCTTAGTGAAATTGAAGCTGAGATGGTCTCGGAGAGACAGAGGAAAGAATCTGCCCCTCCTGTGCTTGCATCTGAGAATGGCTCCGAGAAAACAATGTACTTCTTGGCTGAAGCAATGCATCCCTTTGATGCTTTATCAGAAAATGAACTGAGCTTGAACGGGGGTGACTTCATTGTTGTGAGGAAgGTAAGCTCAACAGGATGGGCAGAAGGAGAATGCAATGGTAGGGGAGGGTGGTTTCCTTATGCGTATGTGGAGAAACGCCAGAGACTTCCTTCTACTAACTTTGCCGCTCAAGCTTACTA 1064 0.4276 MDALRRQASKFRDQVTKQQQAVIKQLSSSKYESSDVMVIDEVEMQTHQQLEKLYRSTRAGKDFQKEVVKAAETFTAIGYKHVEAGMKLSEDCCKYGAENISDNILAKAASVYGDARKHVEKEQEELNQLLHIQVLDPLRAMINGAPLEDARHLAQRYSRMRQEAEAMKEEISRRQARVRESPTPEHVAKLHATEAKVQELKANMAVLGKESTAALAVVEAQQQRLTFQRLVAMVEGEKTFHLRVAAILSEIEAEMVSERQRKESAPPVLASENGSEKTMYFLAEAMHPFDALSENELSLNGGDFIVVRKVSSTGWAEGECNGRGGWFPYAYVEKRQRLPSTNFAAQAY 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00072 348 SMART SH3_2 281 336 IPR001452 GO:0005515
Bva13g00072 348 Gene3D SH3 Domains 271 346 - -
Bva13g00072 348 SUPERFAMILY SH3-domain 264 341 IPR036028 GO:0005515
Bva13g00072 348 Coils Coil 190 210 - -
Bva13g00072 348 Gene3D Arfaptin homology (AH) domain/BAR domain 44 270 IPR027267 -
Bva13g00072 348 Coils Coil 1 21 - -
Bva13g00072 348 Pfam Variant SH3 domain 285 333 IPR001452 GO:0005515
Bva13g00072 348 PANTHER SH3 DOMAIN-CONTAINING 1 347 - -
Bva13g00072 348 ProSiteProfiles Src homology 3 (SH3) domain profile. 278 337 IPR001452 GO:0005515
Bva13g00072 348 SUPERFAMILY BAR/IMD domain-like 46 255 IPR027267 -
Bva13g00072 348 PANTHER SH3 DOMAIN-CONTAINING PROTEIN 3 1 347 - -
Bva13g00072 348 Coils Coil 147 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00072 Bva-Chr13 333884 337795 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00072 - - gmx:100820088 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00072 13 333884 337795 Bva13g00072 13 333884 337795 ECH