Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02788 ATGGGGTCTCTTCTTGCCATATCCACTGCTCTGCTgctgtgttttttctttcaagttcaAGGGCAGAATCGTCACAAAGAGGGAACAAGCACTGGAAATAAAGGGTGTGATTTATTCAGAGGGAGCTGGGTTCTTGATGATTCATACCCTCTTTATGAAACTGCAGAATGTCCATTCATAGAGAAGGAGTTTGATTGTCAGAACAATGGGCGCCCAGATAGATTATATCTCAAGTACAGATGGCAACCCTCTGGCTGCAACTTACCAAGATTCAATGGTGAAGATTTGTTAAGGAGATTGAGAGGGAAGAGTCTCTTGTTTGTCGGTGACTCTCTTAGTTTAAATCAATGGCAATCGCTCACTTGCATGCTTCATACAGCTGTGCCTCAAGCCAAATATGCCTCAGTTAGGACTGGAGATCTCTCCACCTTCACATTCCCGAGGTATGATGTTAAAGTGATGTTCTCCCGAAATGCATTTCTGGTTGATATTGTTAGCCAAAGTATTGGTCGTGTTCTGAAACTGGATTCCATCCAAGCtggaaaattttggaaagGAATTGATGTGTTGATATTCGACTCTTGGCATTGGTGGCTTCATGTTGGAAGAAAACAACCATGGGATTTCATTCAAGATAGAAATCATACGTACAAAGACATGGATCGCTTAGTTGCATATGAGAAAGGATTAAAGACATGGGCGAAATGGGTTGATGGCAATGTCGACTCAACAAAAACTAGGGTTTTCTTTCAAGGTGTTTCTCCGGATCATTCCAAtggaACTCTATGGGGTGAGCCAGAAGCAATGTTTTGTAAGGGGCAAGTGCGACCAGTGCGTGGGTCTGTTTACCCAGGAGGTCCACACCCAGCAGAGTTGGTGCTAGAGAGAGTGCTAAGAGCCATGTCAACACCTGTGTATCTGCTCAACATTACCACCCTTTCTCAGCTGAGGAAAGATGCACACCCATCGGTGTATGGGCATGGTGGCCACAGAGACATGGATTGCAGTCATTGGTGCCTTGCTGGTGTTCCTGATACTTGGAATGAGCTTCTCTATGCAGCTcttatccaaaaata 1076 0.4257 MGSLLAISTALLLCFFFQVQGQNRHKEGTSTGNKGCDLFRGSWVLDDSYPLYETAECPFIEKEFDCQNNGRPDRLYLKYRWQPSGCNLPRFNGEDLLRRLRGKSLLFVGDSLSLNQWQSLTCMLHTAVPQAKYASVRTGDLSTFTFPRYDVKVMFSRNAFLVDIVSQSIGRVLKLDSIQAGKFWKGIDVLIFDSWHWWLHVGRKQPWDFIQDRNHTYKDMDRLVAYEKGLKTWAKWVDGNVDSTKTRVFFQGVSPDHSNGTLWGEPEAMFCKGQVRPVRGSVYPGGPHPAELVLERVLRAMSTPVYLLNITTLSQLRKDAHPSVYGHGGHRDMDCSHWCLAGVPDTWNELLYAALIQK 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02788 358 Pfam PMR5 N terminal Domain 35 87 IPR025846 -
Bva12g02788 358 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 7 356 - -
Bva12g02788 358 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 7 356 IPR029962 GO:0016413
Bva12g02788 358 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 88 353 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02788 Bva-Chr12 20185132 20189260 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02788 - - gmx:100799085 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g00988 12 10297180 10302926 Bva12g02788 12 20185132 20189260 BWGD
Bva12g02788 12 20185132 20189260 Bva12g02788 12 20185132 20189260 ECH