Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02773 ATGGCTTCTATTGCATGCACTGCCCACCGACCCATTCCTTCGAAACCCTTAGCTTCCACTGTTTCTTCACCAAAATTACCTTCTCGCTTTCTGGGTATCAGAAATAAAGTGGGATTTCTCAGACTCACCTCTGAACTTGGTCCCTCTAATGGCTCCAGAGCCAAGTGCTGGTTCAAATTTGGTCAAAATGGGGTCGATGCAGAAGGTGCTGGCATTTATGGTAGCCAATCTCGTGACGATTTTGATAGAGATGACGTTGAGCAGTATTTCAACTACATGGGAATGCTTGCTGTTGAGGGATCATATGACAAAATGGAGGCTCTTTTAAGCCAAAATATCCATCCAGTGGACATCTTACTGCTTTTAGCTGCCACAGAAGGTGACAAGCCAAAAATTGAGGAGCTCTTGAGAGCTGGAGCAAAATATGATGTAAGGGATAAAGATGGAAGGACTGCACTGGATAGGGCTAATGATGAAATCAGAAATTTCATTCTTAGTTTTTCAGCTCAGAGGGCATG 518 0.4382 MASIACTAHRPIPSKPLASTVSSPKLPSRFLGIRNKVGFLRLTSELGPSNGSRAKCWFKFGQNGVDAEGAGIYGSQSRDDFDRDDVEQYFNYMGMLAVEGSYDKMEALLSQNIHPVDILLLLAATEGDKPKIEELLRAGAKYDVRDKDGRTALDRANDEIRNFILSFSAQRA 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02773 172 SUPERFAMILY Ankyrin repeat 95 166 IPR036770 -
Bva12g02773 172 PANTHER PROTEIN LHCP TRANSLOCATION DEFECT 1 172 IPR044242 GO:0006886|GO:0009570|GO:0090391
Bva12g02773 172 Gene3D - 76 170 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02773 Bva-Chr12 20121039 20122907 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02773 - - qsu:111998917 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02773 12 20121039 20122907 Bva12g02773 12 20121039 20122907 ECH