Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02730 ATGGAGGCGCCCTCCTTTGTATCCAAAGCAAGGACTGCCTTCCATTCCGCTGCTGCAAAAGCGGAGCGTGTTATCTCAGACTTCAAATCAGATCGAGATCTTGAGAAACAATCGCCAACCAATTTGACAAAGCAGGGAGAAGATGAATCTACTCGGAGCGAGGGAGAATCGAAGCTTCGCAATGAATTGAAGTATGTCAAGTGGAGACCTCCACATATAGGAATAAAGCAGGAGCTGCAGGATTGGCAAGATAGAATCAAGAACATtcggagagggagaaaagaagTTGAAGATACAGATAAAGTTGAGGATACAACCATGGCTATTCCATTTTATGACGAAAATTTATACATCctgaatatgaaaaatgatcTTGAGGCCAAGgCTGCAGAAGCAATTCCGACAATTGAAGGCTTAAATGCTGCTACTAAAGACCCCATTCCTGCATCATCTGTTGTGAAGCAATTGGCTATAGCTGTTGAGGcaggaaggaaaatgaagtcACTGAAAGATTTTATGGCTTCACCAGCAAGCTCATCACCTGTCAGAGAAAGGGCGGGCATAAGTCTCTCTGCAATGAAGGCTTTAGTTTTGCGTGAAAAAGAAGACTATCTTAACTCGGAGTTCATTAATAATGAGAAAGTTGCATTTTTGATTGATTCTCTCTTTGATCCTGGGGGAGAATTCCTCCAAAGGAAGATCAACTCTGGTTCAGAGGAGGCTGCCATATCTTTGCCAAGAGATATCCATGGTGCCCCTCCTGATAGCCTTGTTGTTAAGCTAGCTGAAGTTACTGGAAACTTCAAAACCCTTCGGAAAATGGCTCTGTTCTGGTGCAGGGTTGTTGTTGAGTTGAGAAAACTCTGGTCTGAAGAGCGCCATTTGCCTGGAGTCCCTGTAGATGAGATTCCGGATCTGAAGTCATGTCTTCTGTATCAACACTTTCAAGTAATTAATTGTTGCATATCTCGGAAAAGGCGTCATGCTATTGCCACAGAATCTCTAGATTCTATGTTGATGGAAGCCAGTTCCAATATAAAAGAATCTGCTGATCATGGTGAGAGGATTCCTGCGAGTCCTCTTTTATATGCTAGACTAAACACTGGGGAGCTTGTCCTTCGTCTAGGTGCTGATCGCCCATGTGGAGATCTGACATTGTTGGAAACTGGCGAGCCTGTGTACTCTCCTTTCACCCAGGAAGAACCTTTGCTTACAGAAGAAATTATCAAAGAAACAGAGGAATTTGTGTTGCGGACAGGCAGTGTTGGTGCTGGATGCTCACAACTCCTCTCAGATATGCAGGCCTTCAAGGCTGCAAATCCTGGTTGTATTTTGGAAGATTTTGTAAGATGGCACTCTCCTCCAGATTGGACAGAAAGTGAGCCAGGTGCTGAGGCTAATGAATTTTTTGATACTTGTGAATCACTGTCCACCAAAGGTCAGCTAAGTCGGCGAATGCAAAAAGAAGGTAATTTGTGGCGTGAATTGTGGGAAACATCTAAACCTGTTCCAGCCGTTAAACAAGCACCTCTCTTTGATGAGGATTTGGCAGTGGAAGGCATCCTGAATGCTTTTGAGGAGATGCCACCTTCTGAGCTTTTTGAACAactgtttgtttcttttCTTGGTTTGGGATTTGCAATTGCTGAACCTGTGCTATCAGGTAACAGTGACTTCTCAAAGTTGTTCTGTGACTGCAAGGAGTACATAGTTGGTGCTTGTCAACGCAACGATTGGAGAGACAAAGTTGATGACCTTTGCCAGGTTTATGAAACAGTGGAGACAATGCTGTTGAATCCTGAGGAAGCTCACAAGATGATGAAGCAGTCAGAAGAATCAACTCCAAATACTGGTGAACCTAAGCGTCGGTTTAAGAGGCTTAGCCTTATATTTAGTGGCAAGGATAAACTCTTGAGGAAATCCTTCTCAAAAGAGCAGATAAACTCCGAAGAGAACCCAACTCGGCAAtctttttcaagtttcttTGATAGCAAGTCTTCTTTATTCTCAAAAAAGCCTCCCAAGCATGGAAATACATCCCCAGCTGGGAAACCTCCTTGTCCAGAAAGTGATTGGACAATTGTTTA 2087 0.4183 MEAPSFVSKARTAFHSAAAKAERVISDFKSDRDLEKQSPTNLTKQGEDESTRSEGESKLRNELKYVKWRPPHIGIKQELQDWQDRIKNIRRGRKEVEDTDKVEDTTMAIPFYDENLYILNMKNDLEAKAAEAIPTIEGLNAATKDPIPASSVVKQLAIAVEAGRKMKSLKDFMASPASSSPVRERAGISLSAMKALVLREKEDYLNSEFINNEKVAFLIDSLFDPGGEFLQRKINSGSEEAAISLPRDIHGAPPDSLVVKLAEVTGNFKTLRKMALFWCRVVVELRKLWSEERHLPGVPVDEIPDLKSCLLYQHFQVINCCISRKRRHAIATESLDSMLMEASSNIKESADHGERIPASPLLYARLNTGELVLRLGADRPCGDLTLLETGEPVYSPFTQEEPLLTEEIIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTESEPGAEANEFFDTCESLSTKGQLSRRMQKEGNLWRELWETSKPVPAVKQAPLFDEDLAVEGILNAFEEMPPSELFEQLFVSFLGLGFAIAEPVLSGNSDFSKLFCDCKEYIVGACQRNDWRDKVDDLCQVYETVETMLLNPEEAHKMMKQSEESTPNTGEPKRRFKRLSLIFSGKDKLLRKSFSKEQINSEENPTRQSFSSFFDSKSSLFSKKPPKHGNTSPAGKPPCPESDWTIV 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02730 695 MobiDBLite consensus disorder prediction 647 674 - -
Bva12g02730 695 Coils Coil 79 99 - -
Bva12g02730 695 Pfam Rab3 GTPase-activating protein catalytic subunit 374 526 IPR026147 -
Bva12g02730 695 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 3 695 - -
Bva12g02730 695 MobiDBLite consensus disorder prediction 643 695 - -
Bva12g02730 695 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 3 695 IPR045700 GO:0005096|GO:0043547
Bva12g02730 695 MobiDBLite consensus disorder prediction 25 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02730 Bva-Chr12 19918154 19925065 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02730 K18270 - gmx:100818643 1004.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02730 12 19918154 19925065 Bva12g02730 12 19918154 19925065 ECH