Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02723 ATGGATCTGGAGGTGGTCGGCCGCCACGCTTTGCTCTTCGACGATGACGCCAATGCAGCGTTCGTCTACTCAAGCAAAGCTCTTGTTGAATGGAATTCTCTCTTGATCGATCGCTACGATGTCCGCCACCTGCTCCCTGGCCATCTACCACCGCGGCTTAAGCGCCGCCCTGTTCATCAGCTGgatgctgctgctgcttctcTGGAGGCAGACCTTGATTATGAACGCTTTCTCGATCTGCTTTCATCACCCTCCGACGAACATGAACAGGACAAGGAACAAGGACCAATAAACTCAGGTGGCTATAATGCTGTTGCGTTTTCATATGGAAATCCTGAAGAGTCCGCCAAGATAGAGGATCATGATAGTCGGTCTGGTTTTCATCCAGACTTCCCAGTACCAGAAAGCTTATGTCAAAACCTGATGCTCGGAGCAGAAATGGAGTTCTTTTACTCAAGGTTGCCATTGACAGGCACCTTATGTCCTTTTGATATCATGACAAAGGGCCGTGCAGAGTTCTGTTTCTTGGTCTTTATGTTTTTCCAAGTATATTTGAggttttattgtgtttatttgCCTCCTAATGAGAAGGTGCATCAGATCATTGCAAGAACTGCTTTGTTTGTCAGCAAGAATGGAGGACAGTCAGAAATTATTCTTAGAGTGAAACAAGGGGATAATCCAACATTTGGGTTCTTGATGCCTGATCACCATCTGTATCCATACTTTAGGTTTCTTGTTGATCACCAAGAAATTCTGAAGCCTGGTGTGGACAAGAATAGAAGTCAGGATACTGATCAAACTGGTGGTGCATTGTCTTTACTTGGTTCTGCCTATGGTTATGGAGAGGATGATGATGGTGCCACTGAGAATACAACTGAATCCAGAAAAAATGAATCTGAGGAAACTGTTGAAGCCTTCACTACTGCATCACAAGGACTAGGGCAGGCAGAGTCTTCTCTGGATGCAACCAAGAAGGATGGAGGCATTTCCAAGGATCCAATATCacctttaaaagaaaagggtcCTGTCATAAAGCGAAATCACTCCATCAGTTCTGTAAAGAATACTAGCACAGGTAGGGCCAAAAAGAGTGGTTCTGTGAATTCATTGTCTAATGTGGCAGACAAATCGCAAACTTCTCTGTCTAGTACAAGCAAGATTGAATTACCTATTTTGGTACCTACATCTGAAATGAAGAGAGTTATTGAGAAGATAGTTGAGTTCATCGTCAAAAATGGCAGAGAATTTGAGACTGTTCTTGCTGAACAGGATCGTGCACATGGAAGGTTCCCATTTCTTCTGTCTTCTAACCTATATCATCCTTACTATCTAAAAGGTCTTCAAAATGCTCAAGAGTCGAAGTTACATGGCAAGGGCTTCCTCCTTGAGAAGCATGACTCATTGGGTCGATTAGGGGACAAGAAATCTGCTGtacacaaagaaaaagacaatcgTTCATTTGGATCTGTGGGTTCTGATATACCCTATGATACTGACCGGAAAGAGAAGTTCAAGATGGTTATTGGCAAATCGAAGAAGGATGGACAGGAACCAACTTCTAAAGACAATCAGCCTCAGGCTGGAGTTATCGTGGATGCTGCAGCTGCAGTGGCTATTCTTCAGGCTGCCACAAGGGGTATCAGAAATCCCAGTCTAGAAATTTTTGCCAAGACATCAAGTGGTAATGGTGAAGGCCCTAGCAGTGATGGTGACCGTTTGGCCAGCTTGAGTCTGCATTCATCTCAGCCACAACAGAGCACAGAGGCTAGTGTTTCTGTCCCTGTTGCAAAGATTATTGCACAGACAGCCGCTATTGCAGCAGCAGGTGAGGCTGACTCTTCTGAAGCAAGCATGACCAGAGAGCAGAAGCTTAAAGCAGAGAGATTGAAACGAGCAAAGATGTTTGCAGCCATGATCAAAGGTGGAGCTGCACCATTGAAAAGTGAACCACTGCGTGGTTTATCAGTTGAGCCACCTGGATCTGGAGTTTCAGGTTCAGGTGCTGAGACTGGGAATCTTGCAGGCAAGGAAAGGGAAGGAAGCTCCGTTCCATTTGGTGCTGATAACTCAGATAAAAGTCAGAAGTCTGAGTTGAAACCCTCGTTTAATGATGAATGGCGATCAAAAAGAAGGTACCGATCAAGGTCCAGAAGACACGAGGAGGAGTTAGAAGAAGAGGGGGAAGATAAAAGTGATCACAAACATCCAAGGAAAAAGCACCGATCCCATCGATCGAGGTCCAAAAGGCAGGAGgagaaggaggaagaagaaaagggggAAGATAGAAGGGATCACAAACATTCCAGGAAAAAGCATCGATCTCATCGATCTTCACACAGCAGCCCGGAGAGGCATAAGCACAAGAAACGACATTCCTCCTCCAAGGACGAGGATTCcaccaaaaggaaaaggcaCGATAGCTCCTCTGACGATGAGCATCAGCAGTCGAGGCATCGTTATGAATATGATAGCTCCTCTGATGAAAAGCACTTCTCTTCTCGACATCGTCACAGAGAGAGTAGCTTGTCTGACGATGAACCTAGACATTCTCGACGTAGGCATAAGCATTATAGCTCCTCTGATGACGAGCATGGGCGTCAAAGAAGCAGCACAAAGCATAAGAGTAGCTCATATGCTGAAAGAGAGACAGACCTAGAGGGAGAGAAATCGGACCAGTCAAAAGCAAGCAGGGGCGTAGGTGCTAGCAGGGAGGCTTCTGTTGAATTATCTAAATCAAGTGACAATGTAAGGGCACCATCTCAACCCTCTGAAACCACCTTGGTTTCTGATGAACTAAGAGCCAAAATTCGAGCCATGTTGATGGCCACCTTGTA 2837 0.436 MDLEVVGRHALLFDDDANAAFVYSSKALVEWNSLLIDRYDVRHLLPGHLPPRLKRRPVHQLDAAAASLEADLDYERFLDLLSSPSDEHEQDKEQGPINSGGYNAVAFSYGNPEESAKIEDHDSRSGFHPDFPVPESLCQNLMLGAEMEFFYSRLPLTGTLCPFDIMTKGRAEFCFLVFMFFQVYLRFYCVYLPPNEKVHQIIARTALFVSKNGGQSEIILRVKQGDNPTFGFLMPDHHLYPYFRFLVDHQEILKPGVDKNRSQDTDQTGGALSLLGSAYGYGEDDDGATENTTESRKNESEETVEAFTTASQGLGQAESSLDATKKDGGISKDPISPLKEKGPVIKRNHSISSVKNTSTGRAKKSGSVNSLSNVADKSQTSLSSTSKIELPILVPTSEMKRVIEKIVEFIVKNGREFETVLAEQDRAHGRFPFLLSSNLYHPYYLKGLQNAQESKLHGKGFLLEKHDSLGRLGDKKSAVHKEKDNRSFGSVGSDIPYDTDRKEKFKMVIGKSKKDGQEPTSKDNQPQAGVIVDAAAAVAILQAATRGIRNPSLEIFAKTSSGNGEGPSSDGDRLASLSLHSSQPQQSTEASVSVPVAKIIAQTAAIAAAGEADSSEASMTREQKLKAERLKRAKMFAAMIKGGAAPLKSEPLRGLSVEPPGSGVSGSGAETGNLAGKEREGSSVPFGADNSDKSQKSELKPSFNDEWRSKRRYRSRSRRHEEELEEEGEDKSDHKHPRKKHRSHRSRSKRQEEKEEEEKGEDRRDHKHSRKKHRSHRSSHSSPERHKHKKRHSSSKDEDSTKRKRHDSSSDDEHQQSRHRYEYDSSSDEKHFSSRHRHRESSLSDDEPRHSRRRHKHYSSSDDEHGRQRSSTKHKSSSYAERETDLEGEKSDQSKASRGVGASREASVELSKSSDNVRAPSQPSETTLVSDELRAKIRAMLMATL 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02723 945 SMART surpneu2 400 453 IPR000061 GO:0003723|GO:0006396
Bva12g02723 945 SMART surpneu2 199 252 IPR000061 GO:0003723|GO:0006396
Bva12g02723 945 MobiDBLite consensus disorder prediction 693 734 - -
Bva12g02723 945 MobiDBLite consensus disorder prediction 474 488 - -
Bva12g02723 945 PANTHER SPLICING FACTOR, SUPPRESSOR OF WHITE-APRICOT HOMOLOG 745 840 - -
Bva12g02723 945 PANTHER SPLICING FACTOR, SUPPRESSOR OF WHITE-APRICOT HOMOLOG 827 944 - -
Bva12g02723 945 PANTHER SPLICING FACTOR, SUPPRESSOR OF WHITE-APRICOT HOMOLOG 1 751 - -
Bva12g02723 945 MobiDBLite consensus disorder prediction 647 930 - -
Bva12g02723 945 SUPERFAMILY Surp module (SWAP domain) 387 447 IPR035967 GO:0003723|GO:0006396
Bva12g02723 945 MobiDBLite consensus disorder prediction 283 380 - -
Bva12g02723 945 MobiDBLite consensus disorder prediction 748 765 - -
Bva12g02723 945 SUPERFAMILY Surp module (SWAP domain) 184 248 IPR035967 GO:0003723|GO:0006396
Bva12g02723 945 MobiDBLite consensus disorder prediction 325 346 - -
Bva12g02723 945 MobiDBLite consensus disorder prediction 474 495 - -
Bva12g02723 945 Gene3D Surp module 374 457 IPR035967 GO:0003723|GO:0006396
Bva12g02723 945 MobiDBLite consensus disorder prediction 349 380 - -
Bva12g02723 945 MobiDBLite consensus disorder prediction 793 894 - -
Bva12g02723 945 ProSiteProfiles SURP motif repeat profile. 201 243 IPR000061 GO:0003723|GO:0006396
Bva12g02723 945 ProSiteProfiles SURP motif repeat profile. 402 444 IPR000061 GO:0003723|GO:0006396
Bva12g02723 945 MobiDBLite consensus disorder prediction 558 590 - -
Bva12g02723 945 Gene3D Surp module 194 249 IPR035967 GO:0003723|GO:0006396
Bva12g02723 945 MobiDBLite consensus disorder prediction 304 319 - -
Bva12g02723 945 Pfam Surp module 401 446 IPR000061 GO:0003723|GO:0006396
Bva12g02723 945 Pfam Surp module 200 248 IPR000061 GO:0003723|GO:0006396
Bva12g02723 945 MobiDBLite consensus disorder prediction 766 792 - -
Bva12g02723 945 SMART DRY_EERY_2 1 113 IPR019147 -
Bva12g02723 945 MobiDBLite consensus disorder prediction 289 303 - -
Bva12g02723 945 MobiDBLite consensus disorder prediction 574 590 - -
Bva12g02723 945 MobiDBLite consensus disorder prediction 907 929 - -
Bva12g02723 945 PANTHER SPLICING FACTOR SUPPRESSOR OF WHITE APRICOT 745 840 IPR040397 -
Bva12g02723 945 PANTHER SPLICING FACTOR SUPPRESSOR OF WHITE APRICOT 827 944 IPR040397 -
Bva12g02723 945 PANTHER SPLICING FACTOR SUPPRESSOR OF WHITE APRICOT 1 751 IPR040397 -
Bva12g02723 945 Coils Coil 710 730 - -
Bva12g02723 945 Pfam Alternative splicing regulator 2 110 IPR019147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02723 Bva-Chr12 19873919 19878655 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02723 - - gmx:100791165 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02723 12 19873919 19878655 Bva12g02723 12 19873919 19878655 ECH