Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02718 ATGAACAAGCCAAACAAGTCTCAACTTCTGCAACTCTTGGTCCTAGTTTTTCTCCTCATCATGACACCTCTTTTACCTTCCTCCCTTAAGTCTCCTTACCtgtattttatcattaactACCTCATCATCGCGCTTGGTGCTGATGCTGGCCTTTTTCCGGTCTTTTCTCGGTCCTTAGAGGAGAAAAAGCAATCTGTTTCTGTTATCCAGAAACCTATAACGCTTCAAGAGGATAAACCAGGGAAAAAGGAAGGTTCCAGCACAACTGCTGTACTTTCTCTTCATGAGCCTAAGGAAACTAAGCCTAAGGTAGTCGAAAAGTGTGTGTCTGAGAAGATTATTGGTATCAACAAAGTGGTGGACAAGGTGAACAAGTGTCCTTCAATGCCAAGCCTTTTCTTCATAGGAGGGGGAGAATCTGAAGCAGAAGCCATGGATGAGGAGTTTGAAGCAGAAGATGATGGGCAAGAGCTGTTTGCAAAAGCTGAGACCTTCATTGGGAACTTCTACAAGCAGTTGAAGATGCAGAGAGAGGAGTCTTGGAAGAATATCCATGAGTTTTATCAGAAAAACTTATA 578 0.4204 MNKPNKSQLLQLLVLVFLLIMTPLLPSSLKSPYLYFIINYLIIALGADAGLFPVFSRSLEEKKQSVSVIQKPITLQEDKPGKKEGSSTTAVLSLHEPKETKPKVVEKCVSEKIIGINKVVDKVNKCPSMPSLFFIGGGESEAEAMDEEFEAEDDGQELFAKAETFIGNFYKQLKMQREESWKNIHEFYQKNL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02718 192 Pfam Cotton fibre expressed protein 156 187 IPR008480 -
Bva12g02718 192 PANTHER OS01G0532300 PROTEIN 1 190 - -
Bva12g02718 192 PANTHER OS01G0532300 PROTEIN 1 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02718 Bva-Chr12 19855129 19856027 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02718 - - tcc:18593453 171.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02718 12 19855129 19856027 Bva12g02718 12 19855129 19856027 ECH