Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02716 ATGAATCGACCAGCTTTGGTACTTCAAATATTAATCCTCCTTTTGGTCAAATCAGAAGGAAGCTCAACGCCAAAACAAGTGTCAATAAATAGCACCAGCCTCATACCAACATCTTCACCATGGCTGGAGAGAGTTATGAACCAAAGACAAACAGGGTGTATTACAAGGCCATGGATATGTGGGGGGAGGGAGTTTCCTCCTAGGAGCCTATGTTGTCGGAACCGTTGTGTGGATTTGAGATCAGACAGAAACAATTGTGGGTTATGTGGAATAAGGTGCGTGTTCAATTGGCAATGCTGCAGAGGTATATGCACTGATACAAAGAGGAACCCTTTCAATTGTGGTAGATGTGGGAATGTATGCCCCAATGGAAGCTTTTGCTTCTATGGGATGTGTGGATATGCAGCGTGGCCATTGCCGCCGCCGCGGCCTCGGCCACCTAAGGTGAAGATACCATATCCACCACACAAACATCATCAGCATCCTCGAGAGTTATA 497 0.4628 MNRPALVLQILILLLVKSEGSSTPKQVSINSTSLIPTSSPWLERVMNQRQTGCITRPWICGGREFPPRSLCCRNRCVDLRSDRNNCGLCGIRCVFNWQCCRGICTDTKRNPFNCGRCGNVCPNGSFCFYGMCGYAAWPLPPPRPRPPKVKIPYPPHKHHQHPREL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02716 165 PANTHER - 22 134 IPR006969 -
Bva12g02716 165 Pfam Stigma-specific protein, Stig1 36 135 IPR006969 -
Bva12g02716 165 PANTHER STIGMA-SPECIFIC STIG1-LIKE PROTEIN 4 22 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02716 Bva-Chr12 19841988 19842485 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02716 - - gmx:100781140 175.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02716 12 19841988 19842485 Bva12g02716 12 19841988 19842485 ECH