Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02715 ATGGCTGCTTCATCTTTGTTTTCCTCGTATTCAATGAGCATGGAAGTGTCTTCCCCCAAGATAGCACAATACCCAGTAGATTATTTGGGGTGTCATAGGAGAATACCCTCTAAGCCACTCGGTTATTTGAATTCAATATGCTGTACTTCTTCAAGATTTCTGAGAAATGGGAAGCTGTCAAAGTGGGAAAAAGCTGAAAGATTCCTACACAAAGCTGGAATCCGCTGCCAAGCTCTTGAAATTGAAGCTGCACCCCCCTCTGTGGGGCAAAAGTTTCAACTTGATGATGTGATTGAAGCTCAACAATTTGATAGAGATATGCTGAATGCTATATTTGATGTTGCAAAGGGTATGGAGAATATTGAAAGGAATTCAGCTGGAAGCCAAGTTCTAAAGGGTTATCTCATGGCTACCCTATTTTACGAGCCGTCCACTAGAACTAGGCTTTCATTTGAGTCTGCTATGAAAAGATTAGGGGGAGAGGTTTTGACAACTGAAAATGCTAGGGAGTTTTCATCAGCAGCTAAAGGAGAGACACTTGAAGATACAATAAGGACAGTTGAGGGTTACTCGGATATAATTGTGATGCGGCACTTTGAAAGCGGTGCTGCCAAAAGAGCTGCAGCTACTGCTGGCATTCCTGTAATCAATGCAGGGGATGGTCCTGGGCAGCATCCTACCCAGGCTCTTCTAGATGTCTATACAATTGAAAGAGAGGTAGGAAAACTTGATGGAATTAAAGTAGGGCTCGTGGGAGACCTTGCTAATGGAAGGACTGTTCGATCACTAGCATACTTGCTTTCTAAGTATaaagatgtgaaaatttattttgtctctcCGGAAGTGGTAAAAATGAAGGATGATATAAAAGAGTTTCTGACGTCAAAGGGGGTGAAATGGGAAGAAAGTGCAGATTTGATGGAAGTGGCGTCTAAATGTGATGTGGTCTATCAAACTCGCATTcagaaagaaagatttggcGAGAGAATCGACCTTTACGAAGAGGCAAGAGGCAAGTATAttgtaaatcaaaatgttCTGAAGGCAATGCAGAAACATGCTGTGGTTATGCACCCTCTTCCAAGACTTGATGAGATAACTGTGGATGTTGACGGTGATCCAAGAGCTGCTTACTTCAGGCAAGCAAAGAATGGGTTATATATTCGAATGGCTCTTCTGAAAGTTCTGCTTGTTGGGTGGTA 1202 0.4077 MAASSLFSSYSMSMEVSSPKIAQYPVDYLGCHRRIPSKPLGYLNSICCTSSRFLRNGKLSKWEKAERFLHKAGIRCQALEIEAAPPSVGQKFQLDDVIEAQQFDRDMLNAIFDVAKGMENIERNSAGSQVLKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVMRHFESGAAKRAAATAGIPVINAGDGPGQHPTQALLDVYTIEREVGKLDGIKVGLVGDLANGRTVRSLAYLLSKYKDVKIYFVSPEVVKMKDDIKEFLTSKGVKWEESADLMEVASKCDVVYQTRIQKERFGERIDLYEEARGKYIVNQNVLKAMQKHAVVMHPLPRLDEITVDVDGDPRAAYFRQAKNGLYIRMALLKVLLVGW 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02715 400 Pfam Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 244 394 IPR006131 GO:0006520|GO:0016597|GO:0016743
Bva12g02715 400 Gene3D Aspartate/ornithine carbamoyltransferase 97 393 IPR036901 GO:0006520|GO:0016597|GO:0016743
Bva12g02715 400 Gene3D Aspartate/ornithine carbamoyltransferase 225 384 IPR036901 GO:0006520|GO:0016597|GO:0016743
Bva12g02715 400 TIGRFAM asp_carb_tr: aspartate carbamoyltransferase 96 397 IPR002082 GO:0004070|GO:0006207
Bva12g02715 400 PRINTS Aspartate carbamoyltransferase signature 130 152 - -
Bva12g02715 400 PRINTS Aspartate carbamoyltransferase signature 316 325 - -
Bva12g02715 400 PRINTS Aspartate carbamoyltransferase signature 224 241 - -
Bva12g02715 400 PRINTS Aspartate carbamoyltransferase signature 356 361 - -
Bva12g02715 400 PRINTS Aspartate carbamoyltransferase signature 170 179 - -
Bva12g02715 400 PRINTS Aspartate carbamoyltransferase signature 378 392 - -
Bva12g02715 400 Pfam Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 96 237 IPR006132 GO:0006520|GO:0016743
Bva12g02715 400 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 140 159 IPR006130 GO:0006520|GO:0016597|GO:0016743
Bva12g02715 400 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 225 236 IPR006130 GO:0006520|GO:0016597|GO:0016743
Bva12g02715 400 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 352 361 IPR006130 GO:0006520|GO:0016597|GO:0016743
Bva12g02715 400 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 362 385 IPR006130 GO:0006520|GO:0016597|GO:0016743
Bva12g02715 400 PANTHER ASPARTATE CARBAMOYLTRANSFERASE, CATALYTIC CHAIN 1 400 - -
Bva12g02715 400 Hamap Aspartate carbamoyltransferase [pyrB]. 94 399 IPR002082 GO:0004070|GO:0006207
Bva12g02715 400 ProSitePatterns Aspartate and ornithine carbamoyltransferases signature. 140 147 IPR006130 GO:0006520|GO:0016597|GO:0016743
Bva12g02715 400 PANTHER CARBAMOYLTRANSFERASE FAMILY MEMBER 1 400 - -
Bva12g02715 400 SUPERFAMILY Aspartate/ornithine carbamoyltransferase 92 397 IPR036901 GO:0006520|GO:0016597|GO:0016743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02715 Bva-Chr12 19838253 19840748 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02715 K00609 - qsu:111988499 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02715 12 19838253 19840748 Bva12g02715 12 19838253 19840748 ECH