Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02711 ATGTCAGGCGTGACAAACGAAGAGGACAAGAAGCCCACCGATCAGGCGGCTCACATCAACCTCAAGGTCAAGGGGCAGGATGGAAATGAAGTTTTCTTCAGGATTAAGAGGAGTACTCAGCTGAAGAAGCTTATGAATGCTTACTGTGACAGACAGTCTGTGGATTTCAACTCCATTGCTTTTCTATTCGATGGTCGTCGACTCCGAGCTGAGCAGACTCCAGATGAGCTGGAAATGGAGGATGGAGATGAGATAGATGCCATGCTTCATCAAACCGGAGTATGTCACAGTGCCCCAAACAGCTACATATATAATGAGAAAGAGACACCGAGATTTAAAACTGAGATAGAATcaaaggagagagagaactCAATGGAGGAGCAGAAGAGAAGCAATGTTCGAAACAACACCTGCTCTTTAAGACAATGGCTaactttattctctttcttcttcttcttcatcacaTTCTCACTTCCTCCATGCGAGTCCTTCAACTATGGCCAAGCTCTCTCCTTGAGCTTCCTCTACTTTGAGTCTCAGCGTTCAGGTCACTTGCCCCATAACCAGAGGGTCACCTGGCGTCACCATTCTGCCCTCACCGATGGCCTTGAACAAGGGGTGGACTTGGTTGGGGGGTACTATGATGCAGGGGACAACGTCAAATTTGGTCTTCCAATGGCATTTACCGTTACCTTGCTCTCGTGGGCTGTCATAGAATACGGTGGAGAAATTGCCGGCGCCGGCGAGTATGCTCACGCGCTAGAGGCCATCAAGTGGGGGACAGATTATTTCATTAAGGCCCATACACACCCTGATGTTCTCTGGGCAGAGGTGGGTGACGGCGACACCGACCACTATTGTTGGCAGAGGCCGGAGGACATGACAACATCACGGCGGGCTTATAAGGTGGACAAGAACAACCCCGGCTCCGACATTGCCGGCGAGACCGCGGCGGCTATGGCCGCAGCATCCATTGTGTTTAGGAGAACGAATCCACATTACTCTCACCTACTGTTGCGCCATGCACAAGAGTTATTTGAGTTTGGTGACAAGTACAAGGGCAAGTATGATGAGAGTGTTGGAGTGGCTAAAGGGTATTATGCTTCTGTTAGTGGGTACAAGGACGAGTTACTGTGGGCAGCTATTTGGCTTTATAAGGCCAGTGACAAGGAGGAATATTTGAGGTATGTTTTGGAGAAGGCTTATGACTTTGGTGGGACCACTTGGGCCATCACTGAATTCAGCTGGGATGTTAAGTACGCTGGTGTTCAAGCAATTGCTTCAATGCTCTTGACGGAAGAAAAGCACAAGAACCACGAGAGCATGCTCAAACAGTATCGTTCAAAAGCCGAGTACTACATCTGCGCATGCCTTAACCTCAACAATCAGACTAACGTGGAGCGCACCCCGGGGGGCTTACTCTACATCCGCCAATGGAACAACATGCAATACGTCGCAACGGCAGCGTTTCTTCTCACCGTTTACTCGGATCATCTCCGAGCCACGCATCAGAAGCTCCGCTGCGAAAAGAGAAGATATGTGGGCCCAGAGGAACTCCTCGCTTTTGCAAAATCACAGGTTGATTACATCTTGGGTTCTAATCCCAGGGGCATAAGCTATTTGGTAGGCTATGGTCCCACTTTCCCCCAGAGGGTGCACCATAGGGGCGCATCCATTGAATCATACAGGGGGAACAAGGGTTTTATCGGGTGCACGCAGGGGTACGATAACTGGTATGGTCGGTCAGATCCCAATCCTAGCATTCTAGCTGGGGCCCTTGTCGGCGGGCCTGATCAGAAGGACCAATTTCGAGACGATAGAGGGAATTACATGCAAACCGAGGCCTGCACCTATAATACAGCGGCACTTGTAGGTGTTTTTGCTAGGTTGCACAGATTAGAAGGTGAAGCTGTTGTATATGATAATTCCCCTTTGATTGCTTCTACCTA 1949 0.4838 MSGVTNEEDKKPTDQAAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGVCHSAPNSYIYNEKETPRFKTEIESKERENSMEEQKRSNVRNNTCSLRQWLTLFSFFFFFITFSLPPCESFNYGQALSLSFLYFESQRSGHLPHNQRVTWRHHSALTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTVTLLSWAVIEYGGEIAGAGEYAHALEAIKWGTDYFIKAHTHPDVLWAEVGDGDTDHYCWQRPEDMTTSRRAYKVDKNNPGSDIAGETAAAMAAASIVFRRTNPHYSHLLLRHAQELFEFGDKYKGKYDESVGVAKGYYASVSGYKDELLWAAIWLYKASDKEEYLRYVLEKAYDFGGTTWAITEFSWDVKYAGVQAIASMLLTEEKHKNHESMLKQYRSKAEYYICACLNLNNQTNVERTPGGLLYIRQWNNMQYVATAAFLLTVYSDHLRATHQKLRCEKRRYVGPEELLAFAKSQVDYILGSNPRGISYLVGYGPTFPQRVHHRGASIESYRGNKGFIGCTQGYDNWYGRSDPNPSILAGALVGGPDQKDQFRDDRGNYMQTEACTYNTAALVGVFARLHRLEGEAVVYDNSPLIAST 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02711 649 Pfam Glycosyl hydrolase family 9 166 626 IPR001701 GO:0004553|GO:0005975
Bva12g02711 649 SMART ubq_7 19 90 IPR000626 GO:0005515
Bva12g02711 649 Gene3D - 2 93 - -
Bva12g02711 649 ProSiteProfiles Ubiquitin domain profile. 17 94 IPR000626 GO:0005515
Bva12g02711 649 Pfam Ubiquitin-2 like Rad60 SUMO-like 19 89 IPR022617 -
Bva12g02711 649 CDD Ubl_Smt3_like 17 90 - -
Bva12g02711 649 PANTHER ENDOGLUCANASE 137 637 - -
Bva12g02711 649 Coils Coil 116 136 - -
Bva12g02711 649 Gene3D - 162 634 IPR012341 GO:0005975
Bva12g02711 649 SUPERFAMILY Ubiquitin-like 7 93 IPR029071 -
Bva12g02711 649 SUPERFAMILY Six-hairpin glycosidases 163 639 IPR008928 GO:0005975
Bva12g02711 649 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 529 555 IPR018221 -
Bva12g02711 649 PANTHER ENDO-1,4-BETA-GLUCANASE 137 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02711 Bva-Chr12 19818746 19825037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02711 164 629 Glycoside Hydrolase AT2G32990 76.017 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02711 - - gmx:100786912 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02711 12 19818746 19825037 Bva12g02711 12 19818746 19825037 ECH