Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02699 ATGGAAATTGATGCCCTTCCTATTAGTTTGGGCTCGAAAGAGAACCAGAAGATCTACGGGGAGTGGTTCGATCTTGCTGATGCGGATGGCGATGGTCGCATTACAGGAAGCGATGCCACGAAGTTTTTTGTCATGTCCAATTTATCACGTCAAGATCTTAAGCAGGTCTGGGCTATTGCAGATTCAAAGCGACAAGGATATCTTGGGTTGAAAGAGTTTATCATTGCCATGCAGCTAGTCTCTTTGGCACAAGGTGGGCACTCAATAACACAAGATCTGCTGACTAGTGATCTTGATGTGGAAAATCTGAAACCTCCGGCAATGGAGGGATTAGATGAAATGCTAACTAAGAAAAAGCATAAACACAAAGAGCTTGCTACAATTGGTAGTTCTAAATTGCAGCCATCACTTTCAAATAGCTGGTTTTCTCCGAAGTCAACAAAAAATATGTCTTTGTCGTCTGTGACATCAATAATTGATGGTTTGAAGAGGTTATACAATCAGAAGTTGAAGCCACTAGAAGTTACTTACcgttttaatgattttgtatCTCCATCATTGACAAGTAGTGATTTTGATGCCAAACCAATGGTTATGCTTTTGGGCCAGTACTCCACTGGAAAAACAACATTCATCAAACATTTGCTTAAAACTAGTTATCCAGGAGCTCATATTGGACCTGAGCCAACAACTGACAGATTTGTCGTTGTCATGTCTGGACCTGATGAGAGAAGTATACCCGGTAATACTGTTGCTGTTCAAGCAGACATGCCCTTCAGTGGTCTCACAACTTTTGGCACAGCTTTTCTGTCAAAATTTGAGTGTTCTCAATTGCCTCATCCTCTACTGGAGCATATAACATTCGTGGATACTCCTGGAGTTTTGTCTGGTGAAAAGCAACGGACACAACGAGCATATGATTTTACGGGTGTAACATCTTGGTTTGCTGCTAAATGTGACCTGATACTCCTTCTTTTTGATCCTCACAAACTTGATGTCAGTGATGAGTTCAAGCGTGTGATATCATCCTTGCGTGGGAATGATGACAAGATTCGAGTAGTTTTGAACAAGGCTGACCAAGTTGATACTCAACAATTGATGAGGGTTTATGGAGCATTAATGTGGTCACTTGGGAAGGTACTCAATACTCCCGAGGTCATGCGTGTGTACATTGGTTCTTTCAACGACAAACCTATAAATGATGATATTAGTGGTCCCATTGGCAAGGAACTCTTTGAAAAAGAACAAGATGGCCTTCTTTCAGATCTGAAAGACATACCAAAGAAGGCTTGTGATCGAAGAATCAATGAATTTGTGAAACGTGCACGGGCTGCCAAGATACATGCTTATATCATCAGTCATCTTAAAAATGAGATGCCTACTATGATTGGCAAAGCTAAAACTCAGCAAAGGCTCATTGATAACTTGGAAACTGAATTTGGAAAGGTACAAAAGGACTACCATCTACCTCCTGGGGACTTCCCAAATGTTGAACATTTCAAGGAGATCTTGAATGGCTACAGcatcgacaagtttgagaaatTGAAACCAAAAATGATACAATCTGTTGATGACATGTTAGGTTATGACATTCCAAACCTATTGAAGAATTTCAGAAATCCTTATGATTA 1631 0.3967 MEIDALPISLGSKENQKIYGEWFDLADADGDGRITGSDATKFFVMSNLSRQDLKQVWAIADSKRQGYLGLKEFIIAMQLVSLAQGGHSITQDLLTSDLDVENLKPPAMEGLDEMLTKKKHKHKELATIGSSKLQPSLSNSWFSPKSTKNMSLSSVTSIIDGLKRLYNQKLKPLEVTYRFNDFVSPSLTSSDFDAKPMVMLLGQYSTGKTTFIKHLLKTSYPGAHIGPEPTTDRFVVVMSGPDERSIPGNTVAVQADMPFSGLTTFGTAFLSKFECSQLPHPLLEHITFVDTPGVLSGEKQRTQRAYDFTGVTSWFAAKCDLILLLFDPHKLDVSDEFKRVISSLRGNDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVMRVYIGSFNDKPINDDISGPIGKELFEKEQDGLLSDLKDIPKKACDRRINEFVKRARAAKIHAYIISHLKNEMPTMIGKAKTQQRLIDNLETEFGKVQKDYHLPPGDFPNVEHFKEILNGYSIDKFEKLKPKMIQSVDDMLGYDIPNLLKNFRNPYD 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02699 543 Pfam N-terminal EH-domain containing protein 161 193 IPR031692 -
Bva12g02699 543 SUPERFAMILY EF-hand 10 89 IPR011992 -
Bva12g02699 543 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 192 428 IPR030381 GO:0005525
Bva12g02699 543 PANTHER EH DOMAIN-CONTAINING PROTEIN 1-LIKE ISOFORM X1 19 541 - -
Bva12g02699 543 Gene3D - 162 534 - -
Bva12g02699 543 CDD EH 19 84 IPR000261 GO:0005515
Bva12g02699 543 ProSiteProfiles EH domain profile. 15 109 IPR000261 GO:0005515
Bva12g02699 543 Pfam Domain of unknown function (DUF5600) 433 534 IPR040990 -
Bva12g02699 543 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 465 IPR027417 -
Bva12g02699 543 PANTHER EH DOMAIN 19 541 - -
Bva12g02699 543 CDD EHD 197 441 - -
Bva12g02699 543 Pfam Cytoskeletal-regulatory complex EF hand 18 80 IPR000261 GO:0005515
Bva12g02699 543 Gene3D - 11 108 - -
Bva12g02699 543 ProSiteProfiles EF-hand calcium-binding domain profile. 14 49 IPR002048 GO:0005509
Bva12g02699 543 Gene3D - 198 426 IPR027417 -
Bva12g02699 543 SMART eh_3 8 103 IPR000261 GO:0005515
Bva12g02699 543 Pfam Dynamin family 198 357 IPR045063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02699 Bva-Chr12 19758393 19765524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02699 1 543 EF-hand Containing Proteins AT3G20290 81.284 0.0 902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02699 K12483 - qsu:112007166 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02699 12 19758393 19765524 Bva12g02699 12 19758393 19765524 ECH