Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02693 ATGGAGCTCTGTAGTGGAAGCTTCAGAACTGTCCTCCATTTCAACCCATCTCCAGGTCGTCTCTGTGTTCTctctgcaaattttttttcactccAAGACCCTTTTCTTCGAAAGAAGACTACAGCCTTCAATTCCTTGAAGCACTCGTCTTTTACCCGCCAAATTCACCTCCTTCAACCTTTGccaaatcatcaaaatttctGTCGATTAACAGTTTCAGCGTCTTCTTCAGTGGCTCTTGGCACAGAAAAAGACCAGCTTCCGGCTGAATTGAAGGTTACCGAGACTGAAGAACCCAATTCCAGAGTCAGATTGCAAGTAGAAGTTCCGCCACTTGTATGCGAGGATTGTTACGAAATGGTCATAGCTGAGTTTACGAAGCAATCGAAGGTTCCTGGATTTCGCCCCAGAAAGAAAGTTCCAGAGAGTATTCTTGTTAATCATGTTGGGAAGAAAAATGTCCAGAAGGCTACTGTTGAGTCTATATTGAGGAGGACACTTTCACATGCTATGACTTCGGTTACAGGAAGGGCTTTGCAAGAGTCAGTACGTATTGTTACTAAATTTTCTGAGATGGAGGAGACATATTCTTCTCTTGGCTATCTCAGATACGAAGTCATTGTGGATGTGGCACCTGAAATCAAATGGATTCCTGAGAATGGGtacaaaaacttgaaaattgtTGTTGAAATAGATAGTGAAATAGATGCCCAAAGAGCTTCTGAAGAACAATTAAGAAGGCGCCTCAAATCCATTGGTTCATTAAGAGTTGTAACTGACAGAGGACTAGAGATTGGTGATCTTGTTGTCATTGACATCTCAGcaacaaaaattgatcaaGATGAATCAAATATGGAAGATATTCCATCTGCTCAAAGTCAAGGGTTTCATTTTGATACGGAAGATGGTGACAAAGTATTACCTGGTTTTGTTGATGCTATTATTGGAATTCGTCCAGGAGACACTAGGTCATTTCCACTTGTATTTCCTGAAACATGGACGCAAGAAAGTCTCCGTGGTGTACATGCTCAATTTACTGTCGAATGCAAAGAACTATTTTACAGAGATTTACCTGAGTTGGATGATTCCATTGCTGATAAGCTTGTCCCAGGATGTACCACAGTGGACCAGgtcaaagaaatattattacagAGATGCCTAGAAGTGGAGCAGACAGCCCGAGAAGAAGCAACAGATAACACCATCCTTGATGTGCTTTCTAAGATGGTAGAGGTTGATATCCCTCGATCGTTGTTTGAGGAACAAGGTAGGCAGCTTTATGGAGCCAACCTATTGGAAATACAGGCGAAAATGAAACTAAACGAACAGCAGTTGGCTTCTCTATCAAGTCCAAAGGCTGTGAGTGAATATCTCGAGTATCAGAAAGACAACAtaacaaatttgataaaacAGAATCTGGCTGTCGTAGATATATATCGACGTGAAAATTTACAGTTTTCTACTGAGGATCTTGTCAAAGAGGTTGAGAATTCTATTGCTGAATTCAAGCGTCATAACCAGCAGTATGATGAGGAACGAGTGAAGCAACAGGTCCAAGAGATATTAGAAGCAGCTAAGGTACTTGAATGGTTAAAAGAACATGCAGAGATTCAATACGTTACCAAATG 1628 0.3894 MELCSGSFRTVLHFNPSPGRLCVLSANFFSLQDPFLRKKTTAFNSLKHSSFTRQIHLLQPLPNHQNFCRLTVSASSSVALGTEKDQLPAELKVTETEEPNSRVRLQVEVPPLVCEDCYEMVIAEFTKQSKVPGFRPRKKVPESILVNHVGKKNVQKATVESILRRTLSHAMTSVTGRALQESVRIVTKFSEMEETYSSLGYLRYEVIVDVAPEIKWIPENGYKNLKIVVEIDSEIDAQRASEEQLRRRLKSIGSLRVVTDRGLEIGDLVVIDISATKIDQDESNMEDIPSAQSQGFHFDTEDGDKVLPGFVDAIIGIRPGDTRSFPLVFPETWTQESLRGVHAQFTVECKELFYRDLPELDDSIADKLVPGCTTVDQVKEILLQRCLEVEQTAREEATDNTILDVLSKMVEVDIPRSLFEEQGRQLYGANLLEIQAKMKLNEQQLASLSSPKAVSEYLEYQKDNITNLIKQNLAVVDIYRRENLQFSTEDLVKEVENSIAEFKRHNQQYDEERVKQQVQEILEAAKVLEWLKEHAEIQYVTK 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02693 542 Gene3D - 89 214 IPR036611 GO:0006457|GO:0015031
Bva12g02693 542 SUPERFAMILY FKBP-like 258 361 - -
Bva12g02693 542 Pfam Bacterial trigger factor protein (TF) C-terminus 374 533 IPR008880 GO:0006457|GO:0015031
Bva12g02693 542 SUPERFAMILY Trigger factor ribosome-binding domain 91 230 IPR036611 GO:0006457|GO:0015031
Bva12g02693 542 Gene3D - 251 358 IPR046357 GO:0003755
Bva12g02693 542 Coils Coil 492 512 - -
Bva12g02693 542 Hamap Trigger factor [tig]. 91 538 IPR005215 GO:0015031
Bva12g02693 542 Gene3D - 221 537 IPR037041 GO:0006457|GO:0015031
Bva12g02693 542 PANTHER TRIGGER FACTOR-LIKE PROTEIN TIG, CHLOROPLASTIC 74 541 - -
Bva12g02693 542 SUPERFAMILY Triger factor/SurA peptide-binding domain-like 360 540 IPR027304 -
Bva12g02693 542 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 74 541 IPR005215 GO:0015031
Bva12g02693 542 Pfam Bacterial trigger factor protein (TF) 92 238 IPR008881 GO:0006457|GO:0015031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02693 Bva-Chr12 19731790 19738207 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02693 K03545 - gmx:100812597 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02693 12 19731790 19738207 Bva12g02693 12 19731790 19738207 ECH