Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02692 ATGCAGAAGGATCTTAATGGTAGTTCACCAAGAGCACTTCGTATCCGAACATCACGAGAGACACCAAAGGATCACCATGGTAATCAACCAGGAACACCTCGTTCCCGGACACCTGGAGAGAGCGTGCACAAGGATCACATTAGTAGTTCCCCAAGAACACCTCGTCGGCGAAGAGGCTCAAATGAGTTTCTTGGTGAGTTAAGCAAACCAAATGGAAGCCATTTACTTGTGGATGAGGAATTCAAGTACAGATCAATGTGGATCCGTGCATATTCGTCTCTGTGGATGCTTGCAGCTTTTCTGCTTGTCATATACTTGGGTCATCTTTACCTCTGGGCGATGGTtgttattattcaaatatttatggCAAGTGAGCTCTTCAATCTACAGAGAAGAGCTAATCAAGATAGACGTATCCCAAGATTTAAGCTCTTAAACTGGCATTTTTTCTTCACAGCAATGCTATTCGTATATGGTCGTATCCTCAGCCAACAGCTTGTGAATGCTATAACATCAGATAAATTCTTCTACAGACTTGTCAGCTGGGTGATCAAGTATCAGATGGTTATATgctatttcttatatattgcTGGTTTCATGTGTTTCATTCTTTCATTAAGGAAGAAGATGTACAAGTATCAGTTTGGCCAGTATGCATGGACTCACATGATACTTATTGTGGTGTTTACCCAGTCTGCATTTACTGCAGCCAATATCTTTGAAGGGATATTCTGGTTTTTGTTACCCGCATTACTCATTGCTGCCAATGATGTTGCTGCATActtctttggtttcttttttgggaGAACACCTCTGATTAAGTTATCTCCAAAGAAAACATGGGAGGGCTTCATTGGAGCATCTATTGTCACCATGATTGCTGCATTTGTGTTTGCAAACATCTTAGGCCGCTTCCAGTGGTTAACATGTCCGAGGAAGGATTTATCAACTGGTTGGCTTGAGTGTGACCCTGGCCCTCTTTTTAAACCAGAATATTACCCCATGCCAGGATGGGTTTCTCACTGGTTGCATTGGAAAGAGATAGCAGTGTTGCCAGTGCAGTGGCATGCATTATGGCTGGGACTATTTGCATCCATCATAGCTCCTTTTGGAGGGTTTTTTGCCAGTGGTTTTAAGAGAGCTTTCAAGATCAAGGATTTCGGTGATAGTATACCTGGACATGGTGGATTTACCGATAGAATGGACTGTCAGATGGTAATGGCTGTTTTTGCCTACATCTACCACCAGTCATTTGTTGTTCTCCAAGGCTATTCAGTTGAAATGTTCATGGACCAGATAATGAGGAACCTCTCTTTTGAGGAGCAGCAAAGTCTCTATATGAAGCTTGGGAAGATATTACAAGAAAGGCATTTTAACCAGTCATG 1385 0.4079 MQKDLNGSSPRALRIRTSRETPKDHHGNQPGTPRSRTPGESVHKDHISSSPRTPRRRRGSNEFLGELSKPNGSHLLVDEEFKYRSMWIRAYSSLWMLAAFLLVIYLGHLYLWAMVVIIQIFMASELFNLQRRANQDRRIPRFKLLNWHFFFTAMLFVYGRILSQQLVNAITSDKFFYRLVSWVIKYQMVICYFLYIAGFMCFILSLRKKMYKYQFGQYAWTHMILIVVFTQSAFTAANIFEGIFWFLLPALLIAANDVAAYFFGFFFGRTPLIKLSPKKTWEGFIGASIVTMIAAFVFANILGRFQWLTCPRKDLSTGWLECDPGPLFKPEYYPMPGWVSHWLHWKEIAVLPVQWHALWLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQMVMAVFAYIYHQSFVVLQGYSVEMFMDQIMRNLSFEEQQSLYMKLGKILQERHFNQS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02692 461 Pfam Cytidylyltransferase family 88 418 - -
Bva12g02692 461 PANTHER PHOSPHATIDATE CYTIDYLYLTRANSFERASE 43 460 IPR016720 GO:0004605
Bva12g02692 461 MobiDBLite consensus disorder prediction 1 15 - -
Bva12g02692 461 ProSitePatterns Phosphatidate cytidylyltransferase signature. 376 402 IPR000374 GO:0016020|GO:0016772
Bva12g02692 461 MobiDBLite consensus disorder prediction 1 65 - -
Bva12g02692 461 PIRSF CDP-DAG_synth_e 27 461 IPR016720 GO:0004605
Bva12g02692 461 MobiDBLite consensus disorder prediction 16 30 - -
Bva12g02692 461 PANTHER PHOSPHATIDATE CYTIDYLYLTRANSFERASE 3 43 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02692 Bva-Chr12 19726441 19731164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02692 1 456 Lipid Metabolism Gene Families AT4G26770 68.288 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02692 K00981 - gmx:100784805 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02692 12 19726441 19731164 Bva12g02692 12 19726441 19731164 ECH